Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RNF220Q5VTB9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 RN7SKP227-201ENST00000364445 330 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 Y_RNA.339-201ENST00000365325 102 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 Y_RNA.356-201ENST00000365475 113 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 SAR1AP2-201ENST00000392696 594 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 RN7SKP123-201ENST00000410732 291 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AL030996.1-201ENST00000411430 235 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 RPS29P7-201ENST00000439662 171 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 FGF7P4-201ENST00000509595 295 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 RN7SKP24-201ENST00000515888 284 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 RNU2-27P-201ENST00000516185 142 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 RN7SKP21-201ENST00000516503 220 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 RNU5B-3P-201ENST00000516601 115 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 TRAV32-201ENST00000553993 340 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 MIR4506-201ENST00000584693 77 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AC009314.1-201ENST00000603871 304 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AC006077.1-201ENST00000604746 343 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AC005046.1-201ENST00000608515 625 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AP003355.3-201ENST00000623465 114 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 AC138627.2-201ENST00000624202 601 ntBASIC3.31□□□□□ -1.88
RNF220Q5VTB9 MFSD8-233ENST00000641482 4860 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 MTND5P1-201ENST00000445440 1375 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 RPL9P7-201ENST00000330965 580 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 SNORD56.1-201ENST00000362913 68 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 MIR548F5-201ENST00000408421 86 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 RNU6-1245P-201ENST00000411130 106 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 GOT2P5-201ENST00000433995 546 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AL513043.1-201ENST00000439124 535 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 RPL9P9-202ENST00000466501 579 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 MTND3P22-201ENST00000510932 243 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 RPS3AP23-202ENST00000574601 686 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 MIR3160-1-201ENST00000577972 85 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 BNIP3P16-201ENST00000589779 534 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AC008739.2-201ENST00000597006 317 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 RNU6-91P-201ENST00000607774 107 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AL132765.2-201ENST00000610812 351 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AL356274.2-201ENST00000624379 3752 ntBASIC3.3□□□□□ -1.88
RNF220Q5VTB9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
RNF220Q5VTB9 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AP003122.5-201ENST00000527668 3766 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 MTND4P23-201ENST00000447723 1363 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 SNORD62.1-201ENST00000362541 86 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 RNU6-487P-201ENST00000365430 104 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 Y_RNA.529-201ENST00000384586 119 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 RN7SKP158-201ENST00000410453 326 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 RN7SKP263-201ENST00000411194 309 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 RPL37P10-201ENST00000412884 288 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC244505.4-201ENST00000434905 287 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC004383.1-201ENST00000438135 289 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 SSXP5-201ENST00000443473 287 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 RNU7-187P-201ENST00000458985 68 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 RPL31P41-201ENST00000477967 372 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC018437.1-201ENST00000492214 406 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 SNORA31.23-201ENST00000517219 133 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 MIR4697-201ENST00000582977 78 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 SRGNP1-201ENST00000603392 451 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC019159.1-201ENST00000605094 187 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC245389.1-201ENST00000605141 529 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AL591516.1-201ENST00000611326 274 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 uc_338.14-201ENST00000613162 166 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC009233.1-201ENST00000616477 371 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms