Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC078899.2-201ENST00000595282 212 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 AP000238.1-201ENST00000608759 426 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 AL365204.3-201ENST00000612448 685 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.04□□□□□ -2.4
UBR4Q5T4S7 MIR377-201ENST00000362145 69 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 RNU6V-201ENST00000384105 107 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 ELOCP6-201ENST00000429066 328 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 ELOCP12-201ENST00000458706 328 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 SNORA31.18-201ENST00000517043 134 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 AC090953.1-201ENST00000604305 1092 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 OR2AQ1P-201ENST00000451972 200 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 AC134050.1-201ENST00000495088 933 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.04□□□□□ -2.4
UBR4Q5T4S7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.04□□□□□ -2.4
UBR4Q5T4S7 U1.36-201ENST00000620684 176 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 RNU6-1222P-201ENST00000384615 107 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 ARPC3P5-201ENST00000448802 534 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 HMGB1P29-201ENST00000505659 499 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 RNU4-16P-201ENST00000364737 141 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 ZFAND6P1-201ENST00000434138 605 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 RNVU1-2-201ENST00000516326 135 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 SNORA31.13-201ENST00000516624 135 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC123786.2-201ENST00000603459 275 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 FARSBP1-201ENST00000435808 1778 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 Y_RNA.37-201ENST00000362606 108 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 MTCO2P12-201ENST00000427426 682 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 RNU6-362P-201ENST00000516736 90 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AP005902.1-201ENST00000521358 186 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC136619.2-201ENST00000563361 631 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC099654.5-201ENST00000636479 350 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC022022.1-201ENST00000430304 178 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 SYPL1P1-201ENST00000473622 768 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 MTCO2P32-201ENST00000514865 403 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 SMARCE1P4-201ENST00000523647 241 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
UBR4Q5T4S7 AC118273.2-201ENST00000532092 465 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 MIR6076-201ENST00000617521 113 ntBASIC0.03□□□□□ -2.4
UBR4Q5T4S7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.03□□□□□ -2.41
UBR4Q5T4S7 IGJP1-201ENST00000522682 475 ntBASIC0.03□□□□□ -2.41
UBR4Q5T4S7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.03□□□□□ -2.41
UBR4Q5T4S7 SNORD14A-201ENST00000606526 91 ntBASIC0.03□□□□□ -2.41
UBR4Q5T4S7 AL133370.2-201ENST00000619934 439 ntBASIC0.03□□□□□ -2.41
UBR4Q5T4S7 RNU6-1155P-201ENST00000363554 107 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 SNORA29-201ENST00000384183 140 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 RNA5SP252-201ENST00000391131 119 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 MTCO3P18-201ENST00000440206 761 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 MTATP6P7-201ENST00000453315 681 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 SCARNA18-201ENST00000459004 134 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 RNA5SP468-201ENST00000516782 93 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 NIFKP6-201ENST00000598115 845 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC097065.2-201ENST00000608159 533 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AL356585.4-201ENST00000623078 1229 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 MIR30A-201ENST00000385092 71 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC010186.2-204ENST00000537668 439 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC106791.2-201ENST00000604680 391 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 RNA5SP275-201ENST00000363936 118 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC009302.1-201ENST00000417147 390 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 HMGN2P16-201ENST00000456802 261 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC091874.1-201ENST00000511402 339 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 RNU6-980P-201ENST00000516925 103 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 MIR6516-201ENST00000630554 81 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 Y_RNA.364-201ENST00000365532 101 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AL596245.1-201ENST00000618994 362 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AC096656.1-201ENST00000623826 1364 ntBASIC0.02□□□□□ -2.41
UBR4Q5T4S7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 SNORA12-201ENST00000391162 147 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 KATNBL1P6-201ENST00000453433 915 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RNU6-775P-201ENST00000459318 96 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RNU6-348P-201ENST00000384386 107 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms