Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.52□□□□□ -2.33
NUP188Q5SRE5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AC083865.1-201ENST00000636634 831 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
NUP188Q5SRE5 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 RNU5A-1-201ENST00000362698 116 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AL022718.1-201ENST00000412004 84 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AC009518.2-201ENST00000418056 731 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 MTND2P9-201ENST00000422293 931 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 PRPS1P1-201ENST00000445305 876 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AC090079.2-201ENST00000575289 768 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.52□□□□□ -2.33
NUP188Q5SRE5 ELOCP5-201ENST00000604924 333 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 AC117490.2-201ENST00000610042 594 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.52□□□□□ -2.33
NUP188Q5SRE5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
NUP188Q5SRE5 RNU6-884P-201ENST00000363889 107 ntBASIC0.51□□□□□ -2.33
NUP188Q5SRE5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
NUP188Q5SRE5 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.51□□□□□ -2.33
NUP188Q5SRE5 RPS27P16-201ENST00000425758 201 ntBASIC0.51□□□□□ -2.33
NUP188Q5SRE5 AL591043.1-201ENST00000432461 424 ntBASIC0.51□□□□□ -2.33
NUP188Q5SRE5 AL606489.2-201ENST00000433886 234 ntBASIC0.51□□□□□ -2.33
NUP188Q5SRE5 MTCO2P20-201ENST00000437339 673 ntBASIC0.51□□□□□ -2.33
NUP188Q5SRE5 AC068135.1-201ENST00000446164 246 ntBASIC0.51□□□□□ -2.33
NUP188Q5SRE5 MTND5P8-201ENST00000449817 1083 ntBASIC0.51□□□□□ -2.33
NUP188Q5SRE5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.51□□□□□ -2.33
NUP188Q5SRE5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.51□□□□□ -2.33
NUP188Q5SRE5 ACA64.5-201ENST00000516207 127 ntBASIC0.51□□□□□ -2.33
NUP188Q5SRE5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
NUP188Q5SRE5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
NUP188Q5SRE5 Y_RNA.549-201ENST00000384657 102 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 RNU2-15P-201ENST00000410692 191 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AL392003.1-201ENST00000434394 243 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.5□□□□□ -2.33
NUP188Q5SRE5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.5□□□□□ -2.33
NUP188Q5SRE5 RNU6-491P-201ENST00000516099 110 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 SCARNA16.2-201ENST00000516520 172 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AC090115.3-201ENST00000553218 849 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AC016542.1-201ENST00000608259 493 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AC017104.5-201ENST00000637647 639 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.5□□□□□ -2.33
NUP188Q5SRE5 RNU6-360P-201ENST00000390944 104 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 C1DP1-201ENST00000426049 402 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 RPP40P1-201ENST00000426762 456 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AC092634.2-201ENST00000428146 1010 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 MTCO3P5-201ENST00000433620 714 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 Z82210.1-201ENST00000440037 231 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.5□□□□□ -2.33
NUP188Q5SRE5 PRELID3BP1-201ENST00000457142 540 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.5□□□□□ -2.33
NUP188Q5SRE5 CYB5AP5-201ENST00000549779 389 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AC009268.1-201ENST00000561352 1203 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AC021171.1-201ENST00000603137 706 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AC011374.2-201ENST00000607135 526 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AC106800.4-201ENST00000614905 153 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 uc_338.22-201ENST00000622722 187 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 AC007792.1-201ENST00000623023 402 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 MTND1P37-201ENST00000636562 264 ntBASIC0.5□□□□□ -2.33
NUP188Q5SRE5 MTCO1P23-201ENST00000415223 1526 ntBASIC0.49□□□□□ -2.33
NUP188Q5SRE5 RNU6-251P-201ENST00000363235 104 ntBASIC0.49□□□□□ -2.33
NUP188Q5SRE5 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
NUP188Q5SRE5 RNU2-43P-201ENST00000410306 190 ntBASIC0.49□□□□□ -2.33
NUP188Q5SRE5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.49□□□□□ -2.33
NUP188Q5SRE5 AC097463.2-201ENST00000421074 142 ntBASIC0.49□□□□□ -2.33
NUP188Q5SRE5 CR769776.1-201ENST00000441254 787 ntBASIC0.49□□□□□ -2.33
NUP188Q5SRE5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.49□□□□□ -2.33
NUP188Q5SRE5 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.49□□□□□ -2.33
NUP188Q5SRE5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.49□□□□□ -2.33
NUP188Q5SRE5 AC023050.2-201ENST00000544968 387 ntBASIC0.49□□□□□ -2.33
NUP188Q5SRE5 AC004217.3-201ENST00000551552 878 ntBASIC0.49□□□□□ -2.33
NUP188Q5SRE5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.49□□□□□ -2.33
NUP188Q5SRE5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.48□□□□□ -2.33
NUP188Q5SRE5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
NUP188Q5SRE5 RNU6-386P-201ENST00000362650 107 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
NUP188Q5SRE5 AC069282.1-201ENST00000411911 526 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 Z95118.1-201ENST00000421372 247 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 ZNF863P-201ENST00000426746 417 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 RPS25P9-201ENST00000435591 252 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 AC098831.1-201ENST00000440661 216 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 AC136628.3-201ENST00000521868 290 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 AC006518.2-201ENST00000542513 940 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 AL355472.4-201ENST00000610233 626 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.48□□□□□ -2.33
NUP188Q5SRE5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.48□□□□□ -2.33
NUP188Q5SRE5 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.48□□□□□ -2.33
NUP188Q5SRE5 AP003400.6-201ENST00000624698 740 ntBASIC0.48□□□□□ -2.33
NUP188Q5SRE5 RNU1-58P-201ENST00000362413 163 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 RNU6-486P-201ENST00000363116 107 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.47□□□□□ -2.33
NUP188Q5SRE5 MIR608-201ENST00000384820 100 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 MIR135A2-201ENST00000384854 100 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 MIR100-201ENST00000385259 80 ntBASIC0.47□□□□□ -2.33
NUP188Q5SRE5 AC010099.3-201ENST00000423896 409 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms