Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC092473.1-201ENST00000441098 221 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 HMGN2P9-201ENST00000476875 229 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CCDC58Q4VC31 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.58□□□□□ -2.32
CCDC58Q4VC31 AC015688.6-201ENST00000577737 104 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 MIR3169-201ENST00000578032 83 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.58□□□□□ -2.32
CCDC58Q4VC31 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC58Q4VC31 AC091946.2-201ENST00000606105 291 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 AL355802.4-201ENST00000607635 548 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 AL133445.2-201ENST00000611191 527 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 MIR6134-201ENST00000617606 109 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
CCDC58Q4VC31 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC58Q4VC31 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CCDC58Q4VC31 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 RNU6-296P-201ENST00000384608 107 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 Y_RNA.548-201ENST00000384656 105 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 MIR608-201ENST00000384820 100 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 MTCO3P1-205ENST00000422088 832 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 FTH1P12-201ENST00000432137 551 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 RPL36AP53-201ENST00000432891 316 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 MTND2P4-201ENST00000445034 1004 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 RPS27P22-201ENST00000478056 241 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AC117454.1-201ENST00000491120 168 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AC090615.1-201ENST00000577519 154 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AP003465.2-201ENST00000602571 373 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AL163051.2-201ENST00000618976 735 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC58Q4VC31 MTND5P35-201ENST00000557537 1720 ntBASIC0.57□□□□□ -2.32
CCDC58Q4VC31 AC233981.2-201ENST00000611524 1614 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
CCDC58Q4VC31 MIR373-201ENST00000362273 69 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 RNU6-1167P-201ENST00000363227 94 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 RNU6-839P-201ENST00000363347 108 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 RNA5SP493-201ENST00000364115 91 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 Y_RNA.255-201ENST00000364581 97 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 RNU6-482P-201ENST00000391068 107 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AL133264.1-201ENST00000407157 562 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC002542.1-201ENST00000440683 193 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AL096829.2-201ENST00000446582 742 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC026410.2-201ENST00000460281 156 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.56□□□□□ -2.32
CCDC58Q4VC31 RNU6-1183P-201ENST00000517054 60 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.56□□□□□ -2.32
CCDC58Q4VC31 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AP000907.2-201ENST00000530827 353 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC005786.1-201ENST00000588553 154 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC012065.4-201ENST00000602445 679 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC073410.2-201ENST00000603240 332 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC096772.1-201ENST00000609146 564 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 MIR6835-201ENST00000621552 64 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 AC092447.10-201ENST00000620607 1652 ntBASIC0.56□□□□□ -2.32
CCDC58Q4VC31 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CCDC58Q4VC31 SNORD114-19-201ENST00000363072 75 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 RNU6-160P-201ENST00000384591 107 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 AL161935.2-201ENST00000414627 60 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 CALM1P1-201ENST00000442082 433 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC58Q4VC31 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.55□□□□□ -2.32
CCDC58Q4VC31 MTND5P13-201ENST00000513046 1079 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC58Q4VC31 RNU2-53P-201ENST00000516257 147 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 RN7SKP88-201ENST00000516847 250 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 AP000889.1-201ENST00000530968 660 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 AL161798.1-201ENST00000604630 131 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 AC009237.15-201ENST00000610252 501 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 7SK.8-201ENST00000612110 250 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 7SK.11-201ENST00000615477 250 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 7SK.13-201ENST00000622040 250 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 AC095038.3-201ENST00000634439 195 ntBASIC0.55□□□□□ -2.32
CCDC58Q4VC31 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC58Q4VC31 Y_RNA.140-201ENST00000363474 103 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 RNU6-1078P-201ENST00000364522 103 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC58Q4VC31 SNORA18.2-201ENST00000383865 132 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 MIR19B1-201ENST00000384829 87 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 RNU6-360P-201ENST00000390944 104 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 GPM6BP2-201ENST00000432046 144 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 GPM6BP1-201ENST00000446387 144 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 FABP5P15-201ENST00000453566 214 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms