Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.32□□□□□ -2.2
FOXF1Q12946 AL606662.1-201ENST00000445763 553 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.32□□□□□ -2.2
FOXF1Q12946 OR6C5P-201ENST00000452388 923 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 MTND1P12-201ENST00000455231 147 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 AC140059.1-201ENST00000489238 361 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 AC139453.3-201ENST00000493276 369 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 RNU6-311P-201ENST00000516224 102 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
FOXF1Q12946 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.32□□□□□ -2.2
FOXF1Q12946 AC079598.5-201ENST00000547460 117 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 AC090888.2-201ENST00000559765 1144 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.32□□□□□ -2.2
FOXF1Q12946 AC002400.1-201ENST00000569310 726 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 MTCO2P2-201ENST00000591258 225 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.32□□□□□ -2.2
FOXF1Q12946 BNIP3P40-201ENST00000596017 556 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 AC073544.2-201ENST00000601155 540 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 AC009974.1-201ENST00000608881 455 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 AP002782.1-201ENST00000623107 614 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.32□□□□□ -2.2
FOXF1Q12946 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.32□□□□□ -2.2
FOXF1Q12946 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.32□□□□□ -2.2
FOXF1Q12946 RNU6-661P-201ENST00000362409 107 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 Y_RNA.18-201ENST00000362461 102 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 RNU6-960P-201ENST00000364056 120 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 RNU4-42P-201ENST00000364738 142 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 RNU5E-6P-201ENST00000365574 115 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 RNU6-701P-201ENST00000384059 107 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 MIR518D-201ENST00000385014 87 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 MIR95-201ENST00000385072 81 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 MIR513B-201ENST00000385136 84 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 SNORA40C-201ENST00000391285 128 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
FOXF1Q12946 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
FOXF1Q12946 RNU6-584P-201ENST00000410350 95 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AC006366.1-201ENST00000422002 759 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 RPS27AP14-201ENST00000422868 454 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.31□□□□□ -2.2
FOXF1Q12946 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.31□□□□□ -2.2
FOXF1Q12946 AC009238.1-201ENST00000442165 424 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AL360221.1-201ENST00000445989 335 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AC009237.6-201ENST00000446969 424 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.31□□□□□ -2.2
FOXF1Q12946 AP001324.2-201ENST00000461163 319 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.31□□□□□ -2.2
FOXF1Q12946 AC096745.1-201ENST00000509945 370 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
FOXF1Q12946 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.31□□□□□ -2.2
FOXF1Q12946 RNU5B-3P-201ENST00000516601 115 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 ACA59.2-201ENST00000517061 156 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 RNU6-1315P-201ENST00000517187 99 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.31□□□□□ -2.2
FOXF1Q12946 GNAI2P1-201ENST00000541815 315 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.31□□□□□ -2.2
FOXF1Q12946 MIR4782-201ENST00000577987 79 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.31□□□□□ -2.2
FOXF1Q12946 MIR4769-201ENST00000584126 77 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AP000240.1-201ENST00000609910 452 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AL139418.1-201ENST00000613613 177 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AC009233.1-201ENST00000616477 371 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.31□□□□□ -2.2
FOXF1Q12946 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
FOXF1Q12946 AC092104.1-201ENST00000497346 1441 ntBASIC1.31□□□□□ -2.2
FOXF1Q12946 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.3□□□□□ -2.2
FOXF1Q12946 Y_RNA.97-201ENST00000363094 102 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 RNY3P13-201ENST00000365542 102 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 SNORA40.19-201ENST00000390846 128 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 RNU6-482P-201ENST00000391068 107 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC119751.3-201ENST00000399720 670 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC127391.1-201ENST00000411737 98 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC108667.1-201ENST00000428618 249 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AL592045.1-201ENST00000429867 352 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.3□□□□□ -2.2
FOXF1Q12946 AL353689.1-201ENST00000438895 199 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 Z73417.1-201ENST00000447373 778 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC104058.1-201ENST00000448028 297 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.3□□□□□ -2.2
FOXF1Q12946 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.3□□□□□ -2.2
FOXF1Q12946 AC092001.1-201ENST00000453012 261 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.3□□□□□ -2.2
FOXF1Q12946 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.3□□□□□ -2.2
FOXF1Q12946 RPL7P43-201ENST00000478876 753 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 MTND2P14-201ENST00000482139 351 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 MTND1P3-201ENST00000484956 952 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC023194.1-201ENST00000493084 308 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 CKS1BP2-201ENST00000497342 240 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.3□□□□□ -2.2
FOXF1Q12946 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC109927.2-201ENST00000506416 303 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC116655.1-201ENST00000508324 901 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC117532.1-201ENST00000514638 323 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.3□□□□□ -2.2
FOXF1Q12946 RNU2-10P-201ENST00000516375 211 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 RNU6-677P-201ENST00000516914 101 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 RNU6-1092P-201ENST00000516955 87 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC011979.2-201ENST00000527568 352 ntBASIC1.3□□□□□ -2.2
FOXF1Q12946 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms