Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RN7SKP158-201ENST00000410453 326 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 OR9R1P-201ENST00000412200 877 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 AC074117.2-201ENST00000417130 397 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN1BQ07699 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN1BQ07699 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN1BQ07699 AC117503.1-201ENST00000472241 394 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 RPS27P27-201ENST00000498779 255 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN1BQ07699 RNU2-53P-201ENST00000516257 147 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 RNA5SP367-201ENST00000516557 118 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.42□□□□□ -2.02
SCN1BQ07699 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN1BQ07699 MIR3944-201ENST00000581277 108 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 uc_338.15-201ENST00000615470 191 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 ATP5A1P2-202ENST00000616464 443 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SCN1BQ07699 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN1BQ07699 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN1BQ07699 AL355596.1-201ENST00000565399 3996 ntBASIC2.42□□□□□ -2.02
SCN1BQ07699 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
SCN1BQ07699 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN1BQ07699 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.41□□□□□ -2.02
SCN1BQ07699 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN1BQ07699 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SCN1BQ07699 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.41□□□□□ -2.02
SCN1BQ07699 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN1BQ07699 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN1BQ07699 RNU6-212P-201ENST00000362642 104 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN1BQ07699 MIR524-201ENST00000385242 87 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 AL161788.1-201ENST00000441805 169 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 AC124916.1-201ENST00000444020 547 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN1BQ07699 AC079382.1-201ENST00000493346 557 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.41□□□□□ -2.02
SCN1BQ07699 RN7SKP298-201ENST00000515950 94 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.41□□□□□ -2.02
SCN1BQ07699 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN1BQ07699 AC008752.3-201ENST00000588113 712 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 ZNF861P-201ENST00000588126 639 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.41□□□□□ -2.02
SCN1BQ07699 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN1BQ07699 RN7SKP299-201ENST00000606679 301 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 uc_338.11-201ENST00000619132 160 ntBASIC2.41□□□□□ -2.02
SCN1BQ07699 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN1BQ07699 RNU6-1120P-201ENST00000362988 108 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 Y_RNA.324-201ENST00000365165 102 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 AC068050.1-201ENST00000394891 380 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 UBA52P6-201ENST00000399822 382 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 BTF3P7-201ENST00000407097 488 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN1BQ07699 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN1BQ07699 RPL23AP49-201ENST00000492925 468 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 AC010493.1-201ENST00000513479 292 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN1BQ07699 RNA5SP341-201ENST00000516261 117 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.4□□□□□ -2.03
SCN1BQ07699 AC022080.3-201ENST00000544433 482 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN1BQ07699 AL138976.2-201ENST00000563989 694 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN1BQ07699 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN1BQ07699 YPEL5P2-201ENST00000605553 359 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 AC022418.1-201ENST00000624118 445 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 Z69720.2-201ENST00000624755 279 ntBASIC2.4□□□□□ -2.03
SCN1BQ07699 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
SCN1BQ07699 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN1BQ07699 Y_RNA.40-201ENST00000362645 93 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 RNU6-529P-201ENST00000363383 104 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 SNORD116-9-201ENST00000384000 95 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 SNORD116-3-201ENST00000384287 95 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 SNORD116-7-201ENST00000384404 95 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 SNORD116-5-201ENST00000384462 95 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 RNU6-393P-201ENST00000384475 107 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 RNU6-1127P-201ENST00000384580 107 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SCN1BQ07699 SNORD70.1-201ENST00000391007 85 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 AL591034.2-201ENST00000402839 359 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 AL591416.1-201ENST00000404015 867 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 RNU2-23P-201ENST00000410545 195 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 CDK8P2-201ENST00000415020 547 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN1BQ07699 AIMP1P2-201ENST00000425294 312 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 RPL35AP12-201ENST00000425362 338 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 AC073464.1-201ENST00000429823 534 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN1BQ07699 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN1BQ07699 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN1BQ07699 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 AC009238.1-201ENST00000442165 424 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 AC009237.6-201ENST00000446969 424 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.39□□□□□ -2.03
SCN1BQ07699 RPS3AP17-201ENST00000472594 777 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 RPS3AP14-201ENST00000483907 780 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 MTCO3P7-201ENST00000510008 774 ntBASIC2.39□□□□□ -2.03
SCN1BQ07699 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN1BQ07699 AC079140.3-201ENST00000511111 550 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms