Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MIR1265-201ENST00000408444 86 ntBASIC-0.12□□□□□ -2.43
TFF3Q07654 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-0.12□□□□□ -2.43
TFF3Q07654 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.12□□□□□ -2.43
TFF3Q07654 SNORA31.6-201ENST00000516241 130 ntBASIC-0.12□□□□□ -2.43
TFF3Q07654 IGJP1-201ENST00000522682 475 ntBASIC-0.12□□□□□ -2.43
TFF3Q07654 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.12□□□□□ -2.43
TFF3Q07654 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.12□□□□□ -2.43
TFF3Q07654 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.12□□□□□ -2.43
TFF3Q07654 AL121652.1-201ENST00000608851 448 ntBASIC-0.12□□□□□ -2.43
TFF3Q07654 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
TFF3Q07654 AC087588.2-201ENST00000617667 426 ntBASIC-0.12□□□□□ -2.43
TFF3Q07654 MTND5P30-201ENST00000452896 1731 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC-0.13□□□□□ -2.43
TFF3Q07654 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 RNU6V-201ENST00000384105 107 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 Y_RNA.493-201ENST00000384422 102 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 RNU6-750P-201ENST00000390946 107 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 RPL21P111-201ENST00000418453 477 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 PTGES3P4-201ENST00000426243 356 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 RPL37P21-201ENST00000435890 276 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 RPL7P43-201ENST00000478876 753 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC-0.13□□□□□ -2.43
TFF3Q07654 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.13□□□□□ -2.43
TFF3Q07654 IGLVI-20-201ENST00000519296 130 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
TFF3Q07654 AC022616.8-201ENST00000533569 253 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.13□□□□□ -2.43
TFF3Q07654 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.13□□□□□ -2.43
TFF3Q07654 Z83818.1-201ENST00000603584 150 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 AC091805.2-201ENST00000603848 235 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 AC015849.6-201ENST00000605454 474 ntBASIC-0.13□□□□□ -2.43
TFF3Q07654 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC-0.13□□□□□ -2.43
TFF3Q07654 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
TFF3Q07654 RNA5SP240-201ENST00000365355 128 ntBASIC-0.14□□□□□ -2.43
TFF3Q07654 SNORA2A-201ENST00000383885 135 ntBASIC-0.14□□□□□ -2.43
TFF3Q07654 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.14□□□□□ -2.43
TFF3Q07654 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.14□□□□□ -2.43
TFF3Q07654 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.14□□□□□ -2.43
TFF3Q07654 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.14□□□□□ -2.43
TFF3Q07654 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.14□□□□□ -2.43
TFF3Q07654 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC-0.14□□□□□ -2.43
TFF3Q07654 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.14□□□□□ -2.43
TFF3Q07654 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.14□□□□□ -2.43
TFF3Q07654 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.14□□□□□ -2.43
TFF3Q07654 AL158163.2-201ENST00000619110 700 ntBASIC-0.14□□□□□ -2.43
TFF3Q07654 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.14□□□□□ -2.43
TFF3Q07654 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.15□□□□□ -2.43
TFF3Q07654 AL391994.1-201ENST00000254724 282 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 MT-TC-201ENST00000387405 66 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
TFF3Q07654 MRPS36P1-201ENST00000421291 307 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 MTND4P20-201ENST00000424125 869 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 HSPE1P9-201ENST00000440046 311 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0.15□□□□□ -2.43
TFF3Q07654 AC092757.1-201ENST00000467293 467 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-0.15□□□□□ -2.43
TFF3Q07654 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
TFF3Q07654 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.15□□□□□ -2.43
TFF3Q07654 COPS8P3-201ENST00000526024 482 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 AC141557.1-201ENST00000540982 400 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.15□□□□□ -2.43
TFF3Q07654 AL391261.3-201ENST00000557194 520 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 AC240442.1-201ENST00000616055 283 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 AC009033.1-201ENST00000624279 431 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 ZNF663P-202ENST00000641770 1131 ntBASIC-0.15□□□□□ -2.43
TFF3Q07654 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
TFF3Q07654 MIRLET7D-201ENST00000362263 87 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 SNORD44.1-201ENST00000363202 61 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 RNU6-374P-201ENST00000364146 108 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 RNU6-115P-201ENST00000364310 107 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 SNORA25B-201ENST00000365507 128 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 SNORD89-201ENST00000390981 114 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 MIR1267-201ENST00000408723 78 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 AL022718.1-201ENST00000412004 84 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 AC096649.2-201ENST00000416186 393 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 Z95118.1-201ENST00000421372 247 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.16□□□□□ -2.44
TFF3Q07654 AC112206.3-201ENST00000514578 389 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 MTATP6P9-201ENST00000515039 680 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.16□□□□□ -2.44
TFF3Q07654 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.16□□□□□ -2.44
TFF3Q07654 MIR3678-201ENST00000578455 94 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 SNRPGP17-201ENST00000603780 214 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 AC112220.3-201ENST00000605502 502 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 AL162730.1-201ENST00000605734 292 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 AP002826.1-201ENST00000608835 315 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 MIR338-201ENST00000636369 67 ntBASIC-0.16□□□□□ -2.44
TFF3Q07654 MIR200A-201ENST00000384875 90 ntBASIC-0.17□□□□□ -2.44
TFF3Q07654 TAF9BP2-201ENST00000400856 499 ntBASIC-0.17□□□□□ -2.44
TFF3Q07654 AC092423.1-201ENST00000430165 186 ntBASIC-0.17□□□□□ -2.44
TFF3Q07654 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC-0.17□□□□□ -2.44
TFF3Q07654 AC004854.1-201ENST00000440356 349 ntBASIC-0.17□□□□□ -2.44
TFF3Q07654 AC013267.1-201ENST00000458227 267 ntBASIC-0.17□□□□□ -2.44
TFF3Q07654 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.17□□□□□ -2.44
TFF3Q07654 AP003049.1-201ENST00000529418 457 ntBASIC-0.17□□□□□ -2.44
TFF3Q07654 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-0.17□□□□□ -2.44
TFF3Q07654 MTCYBP27-201ENST00000555160 670 ntBASIC-0.17□□□□□ -2.44
TFF3Q07654 MIR3937-201ENST00000580135 106 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms