Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AP002392.1-201ENST00000537692 208 ntBASIC3.94□□□□□ -1.78
YBX1P67809 CBX3P4-201ENST00000538909 354 ntBASIC3.94□□□□□ -1.78
YBX1P67809 AC023824.2-201ENST00000566185 400 ntBASIC3.94□□□□□ -1.78
YBX1P67809 MIR4643-201ENST00000577473 78 ntBASIC3.94□□□□□ -1.78
YBX1P67809 AC024220.1-201ENST00000603675 484 ntBASIC3.94□□□□□ -1.78
YBX1P67809 AC240442.1-201ENST00000616055 283 ntBASIC3.94□□□□□ -1.78
YBX1P67809 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.94□□□□□ -1.78
YBX1P67809 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.94□□□□□ -1.78
YBX1P67809 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
YBX1P67809 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
YBX1P67809 HAUS6P2-201ENST00000433254 2404 ntBASIC3.94□□□□□ -1.78
YBX1P67809 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
YBX1P67809 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
YBX1P67809 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
YBX1P67809 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
YBX1P67809 SDAD1P2-201ENST00000441308 2028 ntBASIC3.94□□□□□ -1.78
YBX1P67809 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
YBX1P67809 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
YBX1P67809 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.93□□□□□ -1.78
YBX1P67809 AC006971.1-201ENST00000407916 4486 ntBASIC3.93□□□□□ -1.78
YBX1P67809 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
YBX1P67809 RNU6-428P-201ENST00000362942 107 ntBASIC3.93□□□□□ -1.78
YBX1P67809 Y_RNA.123-201ENST00000363338 102 ntBASIC3.93□□□□□ -1.78
YBX1P67809 SNORD113-8-201ENST00000363497 74 ntBASIC3.93□□□□□ -1.78
YBX1P67809 RNU6-173P-201ENST00000364215 104 ntBASIC3.93□□□□□ -1.78
YBX1P67809 RNU6-335P-201ENST00000364563 113 ntBASIC3.93□□□□□ -1.78
YBX1P67809 RNU6-937P-201ENST00000384325 106 ntBASIC3.93□□□□□ -1.78
YBX1P67809 Y_RNA.506-201ENST00000384494 102 ntBASIC3.93□□□□□ -1.78
YBX1P67809 RNU6-125P-201ENST00000384505 107 ntBASIC3.93□□□□□ -1.78
YBX1P67809 RNU6-493P-201ENST00000391321 108 ntBASIC3.93□□□□□ -1.78
YBX1P67809 RN7SKP202-201ENST00000410439 330 ntBASIC3.93□□□□□ -1.78
YBX1P67809 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.93□□□□□ -1.78
YBX1P67809 AC091390.3-201ENST00000426478 338 ntBASIC3.93□□□□□ -1.78
YBX1P67809 AL627311.1-201ENST00000431514 115 ntBASIC3.93□□□□□ -1.78
YBX1P67809 AC007389.2-201ENST00000434630 306 ntBASIC3.93□□□□□ -1.78
YBX1P67809 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.93□□□□□ -1.78
YBX1P67809 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
YBX1P67809 U8.22-201ENST00000459141 133 ntBASIC3.93□□□□□ -1.78
YBX1P67809 RNU7-120P-201ENST00000459334 63 ntBASIC3.93□□□□□ -1.78
YBX1P67809 SCARNA13-201ENST00000516672 275 ntBASIC3.93□□□□□ -1.78
YBX1P67809 MIR2355-201ENST00000517199 87 ntBASIC3.93□□□□□ -1.78
YBX1P67809 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.93□□□□□ -1.78
YBX1P67809 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.93□□□□□ -1.78
YBX1P67809 AC087441.2-201ENST00000529141 262 ntBASIC3.93□□□□□ -1.78
YBX1P67809 AL360157.1-201ENST00000565962 87 ntBASIC3.93□□□□□ -1.78
YBX1P67809 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.93□□□□□ -1.78
YBX1P67809 MIR5684-201ENST00000585074 65 ntBASIC3.93□□□□□ -1.78
YBX1P67809 RPL23AP78-201ENST00000599928 470 ntBASIC3.93□□□□□ -1.78
YBX1P67809 AL713866.2-201ENST00000603579 219 ntBASIC3.93□□□□□ -1.78
YBX1P67809 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.93□□□□□ -1.78
YBX1P67809 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.93□□□□□ -1.78
YBX1P67809 U2.14-201ENST00000615943 113 ntBASIC3.93□□□□□ -1.78
YBX1P67809 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.93□□□□□ -1.78
YBX1P67809 AC090617.7-201ENST00000623952 126 ntBASIC3.93□□□□□ -1.78
YBX1P67809 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
YBX1P67809 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
YBX1P67809 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
YBX1P67809 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
YBX1P67809 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.93□□□□□ -1.78
YBX1P67809 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.92□□□□□ -1.78
YBX1P67809 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
YBX1P67809 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
YBX1P67809 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
YBX1P67809 MIR411-201ENST00000362239 96 ntBASIC3.92□□□□□ -1.78
YBX1P67809 RNU6-227P-201ENST00000362865 103 ntBASIC3.92□□□□□ -1.78
YBX1P67809 RNU6-1159P-201ENST00000362933 107 ntBASIC3.92□□□□□ -1.78
YBX1P67809 MIR554-201ENST00000384874 96 ntBASIC3.92□□□□□ -1.78
YBX1P67809 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.92□□□□□ -1.78
YBX1P67809 RPL21P40-201ENST00000428586 483 ntBASIC3.92□□□□□ -1.78
YBX1P67809 RPS6P12-201ENST00000432491 726 ntBASIC3.92□□□□□ -1.78
YBX1P67809 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.92□□□□□ -1.78
YBX1P67809 RPL21P13-201ENST00000488305 481 ntBASIC3.92□□□□□ -1.78
YBX1P67809 RNU6-377P-201ENST00000515965 102 ntBASIC3.92□□□□□ -1.78
YBX1P67809 RNA5SP143-201ENST00000516936 115 ntBASIC3.92□□□□□ -1.78
YBX1P67809 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.92□□□□□ -1.78
YBX1P67809 AC025755.1-201ENST00000521306 278 ntBASIC3.92□□□□□ -1.78
YBX1P67809 AP004371.1-201ENST00000525240 214 ntBASIC3.92□□□□□ -1.78
YBX1P67809 AC010186.2-204ENST00000537668 439 ntBASIC3.92□□□□□ -1.78
YBX1P67809 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.92□□□□□ -1.78
YBX1P67809 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.92□□□□□ -1.78
YBX1P67809 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.92□□□□□ -1.78
YBX1P67809 FAM60BP-201ENST00000578364 658 ntBASIC3.92□□□□□ -1.78
YBX1P67809 AC011476.5-201ENST00000615594 130 ntBASIC3.92□□□□□ -1.78
YBX1P67809 LINC00901.1-201ENST00000617252 152 ntBASIC3.92□□□□□ -1.78
YBX1P67809 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
YBX1P67809 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
YBX1P67809 AC018529.3-201ENST00000624212 2254 ntBASIC3.92□□□□□ -1.78
YBX1P67809 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.92□□□□□ -1.78
YBX1P67809 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.92□□□□□ -1.78
YBX1P67809 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
YBX1P67809 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
YBX1P67809 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
YBX1P67809 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
YBX1P67809 SPRR2C-201ENST00000290702 219 ntBASIC3.91□□□□□ -1.78
YBX1P67809 SNORD35B-201ENST00000363660 87 ntBASIC3.91□□□□□ -1.78
YBX1P67809 SNORA7.2-201ENST00000364446 145 ntBASIC3.91□□□□□ -1.78
YBX1P67809 Y_RNA.291-201ENST00000364886 113 ntBASIC3.91□□□□□ -1.78
YBX1P67809 RNA5SP283-201ENST00000365604 119 ntBASIC3.91□□□□□ -1.78
YBX1P67809 AL033519.2-201ENST00000403958 392 ntBASIC3.91□□□□□ -1.78
YBX1P67809 RPL21P65-201ENST00000406094 466 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms