Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RNA5SP443-201ENST00000363083 132 ntBASIC5.08□□□□□ -1.6
USP46P62068 RNU6-799P-201ENST00000363567 107 ntBASIC5.08□□□□□ -1.6
USP46P62068 RNU6-103P-201ENST00000363686 107 ntBASIC5.08□□□□□ -1.6
USP46P62068 RNU4-10P-201ENST00000364383 140 ntBASIC5.08□□□□□ -1.6
USP46P62068 RNU6-245P-201ENST00000384020 107 ntBASIC5.08□□□□□ -1.6
USP46P62068 Y_RNA.420-201ENST00000384043 110 ntBASIC5.08□□□□□ -1.6
USP46P62068 Y_RNA.542-201ENST00000384641 111 ntBASIC5.08□□□□□ -1.6
USP46P62068 U3.40-201ENST00000408706 208 ntBASIC5.08□□□□□ -1.6
USP46P62068 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.08□□□□□ -1.6
USP46P62068 AC068287.1-201ENST00000430283 295 ntBASIC5.08□□□□□ -1.6
USP46P62068 SCARNA22-201ENST00000503991 125 ntBASIC5.08□□□□□ -1.6
USP46P62068 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.08□□□□□ -1.6
USP46P62068 RNU6-436P-201ENST00000516171 114 ntBASIC5.08□□□□□ -1.6
USP46P62068 RNU6-1282P-201ENST00000516735 96 ntBASIC5.08□□□□□ -1.6
USP46P62068 CKS1BP7-201ENST00000522230 235 ntBASIC5.08□□□□□ -1.6
USP46P62068 AP006289.1-201ENST00000538089 277 ntBASIC5.08□□□□□ -1.6
USP46P62068 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
USP46P62068 AC009163.5-201ENST00000575421 637 ntBASIC5.08□□□□□ -1.6
USP46P62068 AC005255.1-201ENST00000593748 216 ntBASIC5.08□□□□□ -1.6
USP46P62068 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.08□□□□□ -1.6
USP46P62068 AC012468.1-201ENST00000604888 430 ntBASIC5.08□□□□□ -1.6
USP46P62068 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.08□□□□□ -1.6
USP46P62068 MIR6853-201ENST00000619642 74 ntBASIC5.08□□□□□ -1.6
USP46P62068 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP46P62068 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.08□□□□□ -1.6
USP46P62068 AC008079.2-201ENST00000623543 20396 ntBASIC5.08□□□□□ -1.6
USP46P62068 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
USP46P62068 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
USP46P62068 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP46P62068 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.07□□□□□ -1.6
USP46P62068 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
USP46P62068 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.07□□□□□ -1.6
USP46P62068 AC079741.1-201ENST00000321498 212 ntBASIC5.07□□□□□ -1.6
USP46P62068 MIR192-201ENST00000384915 110 ntBASIC5.07□□□□□ -1.6
USP46P62068 MIR320B2-201ENST00000408479 138 ntBASIC5.07□□□□□ -1.6
USP46P62068 AC114755.2-201ENST00000413520 361 ntBASIC5.07□□□□□ -1.6
USP46P62068 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.07□□□□□ -1.6
USP46P62068 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.07□□□□□ -1.6
USP46P62068 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.07□□□□□ -1.6
USP46P62068 RPL26P9-201ENST00000457466 433 ntBASIC5.07□□□□□ -1.6
USP46P62068 RN7SL738P-201ENST00000470264 297 ntBASIC5.07□□□□□ -1.6
USP46P62068 AC090525.1-201ENST00000479116 478 ntBASIC5.07□□□□□ -1.6
USP46P62068 AC006517.1-201ENST00000480485 328 ntBASIC5.07□□□□□ -1.6
USP46P62068 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP46P62068 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.07□□□□□ -1.6
USP46P62068 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.07□□□□□ -1.6
USP46P62068 AC090877.1-201ENST00000561418 344 ntBASIC5.07□□□□□ -1.6
USP46P62068 AP000346.3-201ENST00000622821 210 ntBASIC5.07□□□□□ -1.6
USP46P62068 MIR3529-201ENST00000637713 78 ntBASIC5.07□□□□□ -1.6
USP46P62068 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.07□□□□□ -1.6
USP46P62068 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.07□□□□□ -1.6
USP46P62068 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
USP46P62068 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.06□□□□□ -1.6
USP46P62068 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP46P62068 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP46P62068 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP46P62068 AL590240.1-201ENST00000334118 313 ntBASIC5.06□□□□□ -1.6
USP46P62068 RNU6-376P-201ENST00000384731 106 ntBASIC5.06□□□□□ -1.6
USP46P62068 SNORD37.2-201ENST00000391075 66 ntBASIC5.06□□□□□ -1.6
USP46P62068 SNORA26.3-201ENST00000391119 136 ntBASIC5.06□□□□□ -1.6
USP46P62068 MIR208B-201ENST00000401172 77 ntBASIC5.06□□□□□ -1.6
USP46P62068 RPL35AP21-201ENST00000437667 333 ntBASIC5.06□□□□□ -1.6
USP46P62068 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.06□□□□□ -1.6
USP46P62068 AC091179.1-201ENST00000461606 579 ntBASIC5.06□□□□□ -1.6
USP46P62068 AC007215.1-201ENST00000464893 276 ntBASIC5.06□□□□□ -1.6
USP46P62068 RN7SL459P-201ENST00000481078 302 ntBASIC5.06□□□□□ -1.6
USP46P62068 RN7SL558P-201ENST00000497468 299 ntBASIC5.06□□□□□ -1.6
USP46P62068 AC091868.1-201ENST00000508746 304 ntBASIC5.06□□□□□ -1.6
USP46P62068 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.06□□□□□ -1.6
USP46P62068 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.06□□□□□ -1.6
USP46P62068 AC133555.2-201ENST00000550213 292 ntBASIC5.06□□□□□ -1.6
USP46P62068 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.06□□□□□ -1.6
USP46P62068 AC093249.4-201ENST00000564755 259 ntBASIC5.06□□□□□ -1.6
USP46P62068 RN7SL52P-201ENST00000584271 284 ntBASIC5.06□□□□□ -1.6
USP46P62068 AC008745.1-201ENST00000604064 271 ntBASIC5.06□□□□□ -1.6
USP46P62068 AL162713.1-201ENST00000604480 262 ntBASIC5.06□□□□□ -1.6
USP46P62068 AL121932.1-201ENST00000605542 214 ntBASIC5.06□□□□□ -1.6
USP46P62068 RN7SL722P-201ENST00000617780 284 ntBASIC5.06□□□□□ -1.6
USP46P62068 RN7SL565P-201ENST00000618246 284 ntBASIC5.06□□□□□ -1.6
USP46P62068 AC134026.1-201ENST00000623249 2239 ntBASIC5.06□□□□□ -1.6
USP46P62068 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP46P62068 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.06□□□□□ -1.6
USP46P62068 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
USP46P62068 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP46P62068 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP46P62068 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.06□□□□□ -1.6
USP46P62068 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP46P62068 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP46P62068 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP46P62068 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
USP46P62068 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.05□□□□□ -1.6
USP46P62068 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.05□□□□□ -1.6
USP46P62068 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.05□□□□□ -1.6
USP46P62068 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.05□□□□□ -1.6
USP46P62068 RNU6-801P-201ENST00000364087 105 ntBASIC5.05□□□□□ -1.6
USP46P62068 snoU2_19.4-201ENST00000364329 80 ntBASIC5.05□□□□□ -1.6
USP46P62068 SNORA26.5-201ENST00000391215 123 ntBASIC5.05□□□□□ -1.6
USP46P62068 MIR888-201ENST00000401186 77 ntBASIC5.05□□□□□ -1.6
USP46P62068 NDUFB4P6-201ENST00000436819 366 ntBASIC5.05□□□□□ -1.6
USP46P62068 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms