Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CALM2P2-201ENST00000428512 440 ntBASIC2.32□□□□□ -2.04
SRP54P61011 MTATP6P16-201ENST00000434543 526 ntBASIC2.32□□□□□ -2.04
SRP54P61011 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.32□□□□□ -2.04
SRP54P61011 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.32□□□□□ -2.04
SRP54P61011 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.32□□□□□ -2.04
SRP54P61011 AC079781.2-201ENST00000446424 169 ntBASIC2.32□□□□□ -2.04
SRP54P61011 GAPDHP17-201ENST00000449858 1001 ntBASIC2.32□□□□□ -2.04
SRP54P61011 AC112771.1-201ENST00000463581 102 ntBASIC2.32□□□□□ -2.04
SRP54P61011 AF213884.2-201ENST00000510417 903 ntBASIC2.32□□□□□ -2.04
SRP54P61011 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.32□□□□□ -2.04
SRP54P61011 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.32□□□□□ -2.04
SRP54P61011 RNU6-410P-201ENST00000517006 107 ntBASIC2.32□□□□□ -2.04
SRP54P61011 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.32□□□□□ -2.04
SRP54P61011 RPS15AP11-201ENST00000594193 385 ntBASIC2.32□□□□□ -2.04
SRP54P61011 DEFB131E-202ENST00000602581 683 ntBASIC2.32□□□□□ -2.04
SRP54P61011 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.32□□□□□ -2.04
SRP54P61011 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
SRP54P61011 SCARNA4-202ENST00000625402 129 ntBASIC2.32□□□□□ -2.04
SRP54P61011 MIR3529-201ENST00000637713 78 ntBASIC2.32□□□□□ -2.04
SRP54P61011 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.32□□□□□ -2.04
SRP54P61011 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SRP54P61011 MTND5P17-201ENST00000418405 1603 ntBASIC2.31□□□□□ -2.04
SRP54P61011 HAUS6P2-201ENST00000433254 2404 ntBASIC2.31□□□□□ -2.04
SRP54P61011 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SRP54P61011 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SRP54P61011 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SRP54P61011 RNU6-487P-201ENST00000365430 104 ntBASIC2.31□□□□□ -2.04
SRP54P61011 MIR578-201ENST00000384828 96 ntBASIC2.31□□□□□ -2.04
SRP54P61011 MIR10A-201ENST00000385043 110 ntBASIC2.31□□□□□ -2.04
SRP54P61011 EEF1A1P40-201ENST00000412883 573 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.31□□□□□ -2.04
SRP54P61011 MTND3P17-201ENST00000416968 344 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.31□□□□□ -2.04
SRP54P61011 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.31□□□□□ -2.04
SRP54P61011 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.31□□□□□ -2.04
SRP54P61011 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.31□□□□□ -2.04
SRP54P61011 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.31□□□□□ -2.04
SRP54P61011 AL356320.1-201ENST00000429616 163 ntBASIC2.31□□□□□ -2.04
SRP54P61011 RPS12P2-201ENST00000439728 269 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.31□□□□□ -2.04
SRP54P61011 AL031659.1-201ENST00000447075 539 ntBASIC2.31□□□□□ -2.04
SRP54P61011 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.31□□□□□ -2.04
SRP54P61011 AL513124.1-201ENST00000450410 614 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.31□□□□□ -2.04
SRP54P61011 SNRPGP9-201ENST00000456025 225 ntBASIC2.31□□□□□ -2.04
SRP54P61011 KLF3P2-201ENST00000465138 268 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
SRP54P61011 RBBP4P6-201ENST00000508098 202 ntBASIC2.31□□□□□ -2.04
SRP54P61011 MTCYBP20-201ENST00000524239 1129 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AP000889.2-201ENST00000532684 490 ntBASIC2.31□□□□□ -2.04
SRP54P61011 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
SRP54P61011 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.31□□□□□ -2.04
SRP54P61011 AC025678.1-201ENST00000567861 338 ntBASIC2.31□□□□□ -2.04
SRP54P61011 Z94722.1-201ENST00000604328 474 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AL138963.2-201ENST00000605137 226 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.31□□□□□ -2.04
SRP54P61011 AC067747.1-201ENST00000608026 250 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.31□□□□□ -2.04
SRP54P61011 AC245884.12-201ENST00000615364 59 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC009233.1-201ENST00000616477 371 ntBASIC2.31□□□□□ -2.04
SRP54P61011 MIR5739-201ENST00000619803 80 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC120349.3-201ENST00000624377 529 ntBASIC2.31□□□□□ -2.04
SRP54P61011 AC110994.2-201ENST00000635481 492 ntBASIC2.31□□□□□ -2.04
SRP54P61011 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.31□□□□□ -2.04
SRP54P61011 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
SRP54P61011 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.3□□□□□ -2.04
SRP54P61011 RNU6-858P-201ENST00000362436 107 ntBASIC2.3□□□□□ -2.04
SRP54P61011 RNU1-72P-201ENST00000362976 153 ntBASIC2.3□□□□□ -2.04
SRP54P61011 RNU6-942P-201ENST00000363002 107 ntBASIC2.3□□□□□ -2.04
SRP54P61011 RNU1-91P-201ENST00000364746 163 ntBASIC2.3□□□□□ -2.04
SRP54P61011 SNORA6-201ENST00000384033 151 ntBASIC2.3□□□□□ -2.04
SRP54P61011 RNU6-1179P-201ENST00000384667 107 ntBASIC2.3□□□□□ -2.04
SRP54P61011 BTF3P7-201ENST00000407097 488 ntBASIC2.3□□□□□ -2.04
SRP54P61011 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.3□□□□□ -2.04
SRP54P61011 RN7SKP192-201ENST00000411291 327 ntBASIC2.3□□□□□ -2.04
SRP54P61011 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.3□□□□□ -2.04
SRP54P61011 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.3□□□□□ -2.04
SRP54P61011 MTND2P18-201ENST00000419962 1030 ntBASIC2.3□□□□□ -2.04
SRP54P61011 AC016691.1-201ENST00000441321 413 ntBASIC2.3□□□□□ -2.04
SRP54P61011 AL022238.1-201ENST00000442557 355 ntBASIC2.3□□□□□ -2.04
SRP54P61011 AL353705.4-201ENST00000449661 238 ntBASIC2.3□□□□□ -2.04
SRP54P61011 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.3□□□□□ -2.04
SRP54P61011 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.3□□□□□ -2.04
SRP54P61011 HMGB1P30-201ENST00000492455 606 ntBASIC2.3□□□□□ -2.04
SRP54P61011 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.3□□□□□ -2.04
SRP54P61011 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.3□□□□□ -2.04
SRP54P61011 SNORA25.11-201ENST00000515935 105 ntBASIC2.3□□□□□ -2.04
SRP54P61011 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.3□□□□□ -2.04
SRP54P61011 AC060788.1-201ENST00000521318 469 ntBASIC2.3□□□□□ -2.04
SRP54P61011 AC136619.2-201ENST00000563361 631 ntBASIC2.3□□□□□ -2.04
SRP54P61011 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SRP54P61011 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
SRP54P61011 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SRP54P61011 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SRP54P61011 RNA5SP240-201ENST00000365355 128 ntBASIC2.29□□□□□ -2.04
SRP54P61011 RNU6-843P-201ENST00000384454 104 ntBASIC2.29□□□□□ -2.04
SRP54P61011 AL133475.1-201ENST00000404414 305 ntBASIC2.29□□□□□ -2.04
SRP54P61011 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
SRP54P61011 RNA5SP111-201ENST00000411386 101 ntBASIC2.29□□□□□ -2.04
SRP54P61011 EIF4EP4-201ENST00000424916 578 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms