Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTP1P59025 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTP1P59025 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTP1P59025 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.22□□□□□ -1.73
RTP1P59025 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.22□□□□□ -1.73
RTP1P59025 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RTP1P59025 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
RTP1P59025 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTP1P59025 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTP1P59025 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTP1P59025 RNU6-512P-201ENST00000364438 103 ntBASIC4.21□□□□□ -1.74
RTP1P59025 RNU6-1062P-201ENST00000383908 107 ntBASIC4.21□□□□□ -1.74
RTP1P59025 Y_RNA.515-201ENST00000384535 112 ntBASIC4.21□□□□□ -1.74
RTP1P59025 Y_RNA.518-201ENST00000384552 113 ntBASIC4.21□□□□□ -1.74
RTP1P59025 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.21□□□□□ -1.74
RTP1P59025 HSPE1P6-201ENST00000479457 291 ntBASIC4.21□□□□□ -1.74
RTP1P59025 HMGB3P17-201ENST00000504195 649 ntBASIC4.21□□□□□ -1.74
RTP1P59025 AC025465.3-201ENST00000510570 311 ntBASIC4.21□□□□□ -1.74
RTP1P59025 Y_RNA.673-201ENST00000516306 88 ntBASIC4.21□□□□□ -1.74
RTP1P59025 MIR892C-201ENST00000516410 77 ntBASIC4.21□□□□□ -1.74
RTP1P59025 RNU6-1315P-201ENST00000517187 99 ntBASIC4.21□□□□□ -1.74
RTP1P59025 RN7SKP40-201ENST00000517211 242 ntBASIC4.21□□□□□ -1.74
RTP1P59025 RN7SKP289-201ENST00000517244 295 ntBASIC4.21□□□□□ -1.74
RTP1P59025 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTP1P59025 AL137849.1-201ENST00000604767 169 ntBASIC4.21□□□□□ -1.74
RTP1P59025 AC130454.1-201ENST00000622948 401 ntBASIC4.21□□□□□ -1.74
RTP1P59025 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTP1P59025 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTP1P59025 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTP1P59025 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RTP1P59025 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
RTP1P59025 MTND5P6-201ENST00000422338 1798 ntBASIC4.2□□□□□ -1.74
RTP1P59025 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RTP1P59025 MAPK10-373ENST00000641983 6772 ntBASIC4.2□□□□□ -1.74
RTP1P59025 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTP1P59025 RNU6-1317P-201ENST00000364582 104 ntBASIC4.2□□□□□ -1.74
RTP1P59025 SAR1AP2-201ENST00000392696 594 ntBASIC4.2□□□□□ -1.74
RTP1P59025 HLFP1-201ENST00000402375 499 ntBASIC4.2□□□□□ -1.74
RTP1P59025 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.2□□□□□ -1.74
RTP1P59025 AC092573.2-201ENST00000434546 243 ntBASIC4.2□□□□□ -1.74
RTP1P59025 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.2□□□□□ -1.74
RTP1P59025 USP9YP7-201ENST00000436723 430 ntBASIC4.2□□□□□ -1.74
RTP1P59025 USP9YP32-201ENST00000452432 430 ntBASIC4.2□□□□□ -1.74
RTP1P59025 SNORD105B-201ENST00000458770 79 ntBASIC4.2□□□□□ -1.74
RTP1P59025 RNU6-1037P-201ENST00000459571 107 ntBASIC4.2□□□□□ -1.74
RTP1P59025 AC008155.2-201ENST00000464337 397 ntBASIC4.2□□□□□ -1.74
RTP1P59025 RPL23AP94-201ENST00000512518 302 ntBASIC4.2□□□□□ -1.74
RTP1P59025 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.2□□□□□ -1.74
RTP1P59025 RNU6-570P-201ENST00000517051 105 ntBASIC4.2□□□□□ -1.74
RTP1P59025 AC109329.1-201ENST00000518744 317 ntBASIC4.2□□□□□ -1.74
RTP1P59025 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.2□□□□□ -1.74
RTP1P59025 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.2□□□□□ -1.74
RTP1P59025 MIR5701-3-201ENST00000578890 82 ntBASIC4.2□□□□□ -1.74
RTP1P59025 MIR4513-201ENST00000581077 86 ntBASIC4.2□□□□□ -1.74
RTP1P59025 MIR5701-1-201ENST00000585138 82 ntBASIC4.2□□□□□ -1.74
RTP1P59025 SNORA62.6-201ENST00000606322 83 ntBASIC4.2□□□□□ -1.74
RTP1P59025 MIR5701-2-201ENST00000615634 82 ntBASIC4.2□□□□□ -1.74
RTP1P59025 SDR42E1P4-201ENST00000620894 481 ntBASIC4.2□□□□□ -1.74
RTP1P59025 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.2□□□□□ -1.74
RTP1P59025 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.2□□□□□ -1.74
RTP1P59025 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RTP1P59025 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
RTP1P59025 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTP1P59025 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTP1P59025 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.19□□□□□ -1.74
RTP1P59025 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTP1P59025 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTP1P59025 RPL9P7-201ENST00000330965 580 ntBASIC4.19□□□□□ -1.74
RTP1P59025 RNU6-1074P-201ENST00000383995 104 ntBASIC4.19□□□□□ -1.74
RTP1P59025 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.19□□□□□ -1.74
RTP1P59025 RNA5SP120-201ENST00000410900 112 ntBASIC4.19□□□□□ -1.74
RTP1P59025 AL096701.2-201ENST00000416920 238 ntBASIC4.19□□□□□ -1.74
RTP1P59025 AC139712.2-201ENST00000424302 339 ntBASIC4.19□□□□□ -1.74
RTP1P59025 AL513043.1-201ENST00000439124 535 ntBASIC4.19□□□□□ -1.74
RTP1P59025 LINC01399-202ENST00000458450 244 ntBASIC4.19□□□□□ -1.74
RTP1P59025 RPL9P9-202ENST00000466501 579 ntBASIC4.19□□□□□ -1.74
RTP1P59025 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.19□□□□□ -1.74
RTP1P59025 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.19□□□□□ -1.74
RTP1P59025 RNU6-143P-201ENST00000516942 93 ntBASIC4.19□□□□□ -1.74
RTP1P59025 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.19□□□□□ -1.74
RTP1P59025 AP003733.2-201ENST00000529409 171 ntBASIC4.19□□□□□ -1.74
RTP1P59025 AL157871.3-201ENST00000557231 293 ntBASIC4.19□□□□□ -1.74
RTP1P59025 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.19□□□□□ -1.74
RTP1P59025 AC012433.1-201ENST00000588916 398 ntBASIC4.19□□□□□ -1.74
RTP1P59025 AL390123.1-201ENST00000603216 237 ntBASIC4.19□□□□□ -1.74
RTP1P59025 AC098826.3-201ENST00000603823 466 ntBASIC4.19□□□□□ -1.74
RTP1P59025 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.19□□□□□ -1.74
RTP1P59025 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTP1P59025 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RTP1P59025 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTP1P59025 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.19□□□□□ -1.74
RTP1P59025 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.19□□□□□ -1.74
RTP1P59025 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTP1P59025 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTP1P59025 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTP1P59025 Y_RNA.105-201ENST00000363182 111 ntBASIC4.18□□□□□ -1.74
RTP1P59025 RNU6-384P-201ENST00000364900 104 ntBASIC4.18□□□□□ -1.74
RTP1P59025 RNU6-356P-201ENST00000384140 107 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms