Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.52□□□□□ -2.17
CMC4P56277 AL356583.2-201ENST00000426536 280 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.52□□□□□ -2.17
CMC4P56277 PGBD4P3-201ENST00000440731 581 ntBASIC1.52□□□□□ -2.17
CMC4P56277 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.52□□□□□ -2.17
CMC4P56277 AC009238.1-201ENST00000442165 424 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC009237.6-201ENST00000446969 424 ntBASIC1.52□□□□□ -2.17
CMC4P56277 FABP5P13-201ENST00000452144 328 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC073901.1-201ENST00000462471 408 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.52□□□□□ -2.17
CMC4P56277 AC092436.1-201ENST00000506450 503 ntBASIC1.52□□□□□ -2.17
CMC4P56277 SNORA31.11-201ENST00000516528 139 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.52□□□□□ -2.17
CMC4P56277 IGKV3-31-201ENST00000523109 329 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AP003072.2-201ENST00000527756 676 ntBASIC1.52□□□□□ -2.17
CMC4P56277 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.52□□□□□ -2.17
CMC4P56277 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.52□□□□□ -2.17
CMC4P56277 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.52□□□□□ -2.17
CMC4P56277 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.52□□□□□ -2.17
CMC4P56277 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.52□□□□□ -2.17
CMC4P56277 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.52□□□□□ -2.17
CMC4P56277 RPS3AP23-202ENST00000574601 686 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC078899.2-201ENST00000595282 212 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC092354.1-201ENST00000606057 376 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC126118.1-201ENST00000607744 628 ntBASIC1.52□□□□□ -2.17
CMC4P56277 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.52□□□□□ -2.17
CMC4P56277 AP001486.3-201ENST00000615334 372 ntBASIC1.52□□□□□ -2.17
CMC4P56277 U6.42-201ENST00000618440 107 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC008121.3-201ENST00000618726 433 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC131159.1-201ENST00000621854 213 ntBASIC1.52□□□□□ -2.17
CMC4P56277 DUXAP9-208ENST00000622815 614 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC079248.2-201ENST00000623779 326 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC017037.3-201ENST00000625016 472 ntBASIC1.52□□□□□ -2.17
CMC4P56277 SCARNA4-202ENST00000625402 129 ntBASIC1.52□□□□□ -2.17
CMC4P56277 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.52□□□□□ -2.17
CMC4P56277 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.52□□□□□ -2.17
CMC4P56277 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.52□□□□□ -2.17
CMC4P56277 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CMC4P56277 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.52□□□□□ -2.17
CMC4P56277 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CMC4P56277 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CMC4P56277 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CMC4P56277 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CMC4P56277 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CMC4P56277 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CMC4P56277 RNU6-529P-201ENST00000363383 104 ntBASIC1.51□□□□□ -2.17
CMC4P56277 XGY1-201ENST00000381172 446 ntBASIC1.51□□□□□ -2.17
CMC4P56277 RNU6-622P-201ENST00000384272 103 ntBASIC1.51□□□□□ -2.17
CMC4P56277 SNORA24.1-201ENST00000384401 135 ntBASIC1.51□□□□□ -2.17
CMC4P56277 RNU1-57P-201ENST00000384491 166 ntBASIC1.51□□□□□ -2.17
CMC4P56277 RNA5SP270-201ENST00000411361 118 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AC114491.1-201ENST00000416095 246 ntBASIC1.51□□□□□ -2.17
CMC4P56277 ELOCP4-201ENST00000420090 333 ntBASIC1.51□□□□□ -2.17
CMC4P56277 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.51□□□□□ -2.17
CMC4P56277 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.51□□□□□ -2.17
CMC4P56277 MTCO3P5-201ENST00000433620 714 ntBASIC1.51□□□□□ -2.17
CMC4P56277 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.51□□□□□ -2.17
CMC4P56277 AL591719.1-201ENST00000444669 744 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AC055731.1-201ENST00000474387 401 ntBASIC1.51□□□□□ -2.17
CMC4P56277 HMGB1P30-201ENST00000492455 606 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.51□□□□□ -2.17
CMC4P56277 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.51□□□□□ -2.17
CMC4P56277 AC107393.1-201ENST00000512403 346 ntBASIC1.51□□□□□ -2.17
CMC4P56277 RN7SKP287-201ENST00000516546 266 ntBASIC1.51□□□□□ -2.17
CMC4P56277 RNU6-685P-201ENST00000517088 95 ntBASIC1.51□□□□□ -2.17
CMC4P56277 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.51□□□□□ -2.17
CMC4P56277 IGLV3-17-201ENST00000519099 244 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AC106038.2-201ENST00000520706 568 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AC022616.3-201ENST00000523940 148 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.51□□□□□ -2.17
CMC4P56277 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.51□□□□□ -2.17
CMC4P56277 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.51□□□□□ -2.17
CMC4P56277 WISP1-OT1-201ENST00000602893 642 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AL353778.1-201ENST00000603149 408 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AC012360.2-201ENST00000609349 391 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.51□□□□□ -2.17
CMC4P56277 MIR6840-201ENST00000611937 71 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AC011890.2-201ENST00000613393 294 ntBASIC1.51□□□□□ -2.17
CMC4P56277 AC108479.2-201ENST00000617314 601 ntBASIC1.51□□□□□ -2.17
CMC4P56277 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
CMC4P56277 RBBP8P1-201ENST00000449447 1844 ntBASIC1.5□□□□□ -2.17
CMC4P56277 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CMC4P56277 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CMC4P56277 RNU6-61P-201ENST00000365528 109 ntBASIC1.5□□□□□ -2.17
CMC4P56277 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CMC4P56277 SNORA80E-201ENST00000384744 137 ntBASIC1.5□□□□□ -2.17
CMC4P56277 AL031577.2-201ENST00000404133 280 ntBASIC1.5□□□□□ -2.17
CMC4P56277 RNA5SP390-201ENST00000410191 113 ntBASIC1.5□□□□□ -2.17
CMC4P56277 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.5□□□□□ -2.17
CMC4P56277 EDDM3CP-201ENST00000415977 425 ntBASIC1.5□□□□□ -2.17
CMC4P56277 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.5□□□□□ -2.17
CMC4P56277 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.5□□□□□ -2.17
CMC4P56277 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.5□□□□□ -2.17
CMC4P56277 AC011233.1-201ENST00000422812 283 ntBASIC1.5□□□□□ -2.17
CMC4P56277 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.5□□□□□ -2.17
CMC4P56277 AC007283.2-201ENST00000424739 197 ntBASIC1.5□□□□□ -2.17
CMC4P56277 AC008267.5-201ENST00000424928 265 ntBASIC1.5□□□□□ -2.17
CMC4P56277 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.5□□□□□ -2.17
CMC4P56277 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.5□□□□□ -2.17
CMC4P56277 UBE2D3P4-201ENST00000441973 436 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms