Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC107934.1-201ENST00000522215 217 ntBASIC1.87□□□□□ -2.11
CDH6P55285 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.87□□□□□ -2.11
CDH6P55285 AL354943.1-201ENST00000572103 781 ntBASIC1.87□□□□□ -2.11
CDH6P55285 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
CDH6P55285 AC018714.1-201ENST00000605028 208 ntBASIC1.87□□□□□ -2.11
CDH6P55285 NDUFA8P1-201ENST00000605525 367 ntBASIC1.87□□□□□ -2.11
CDH6P55285 AP002782.1-201ENST00000623107 614 ntBASIC1.87□□□□□ -2.11
CDH6P55285 MIR3529-201ENST00000637713 78 ntBASIC1.87□□□□□ -2.11
CDH6P55285 RNU6-858P-201ENST00000362436 107 ntBASIC1.86□□□□□ -2.11
CDH6P55285 RNU5E-1-201ENST00000362477 120 ntBASIC1.86□□□□□ -2.11
CDH6P55285 U3.13-201ENST00000364804 214 ntBASIC1.86□□□□□ -2.11
CDH6P55285 RNU1-57P-201ENST00000384491 166 ntBASIC1.86□□□□□ -2.11
CDH6P55285 MIR583-201ENST00000384846 75 ntBASIC1.86□□□□□ -2.11
CDH6P55285 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
CDH6P55285 RNU6-584P-201ENST00000410350 95 ntBASIC1.86□□□□□ -2.11
CDH6P55285 AC138623.1-201ENST00000418060 216 ntBASIC1.86□□□□□ -2.11
CDH6P55285 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH6P55285 RPL37P21-201ENST00000435890 276 ntBASIC1.86□□□□□ -2.11
CDH6P55285 AL008629.1-201ENST00000438615 184 ntBASIC1.86□□□□□ -2.11
CDH6P55285 DNAJC19P4-201ENST00000440115 345 ntBASIC1.86□□□□□ -2.11
CDH6P55285 SSXP1-201ENST00000453640 473 ntBASIC1.86□□□□□ -2.11
CDH6P55285 MTND1P12-201ENST00000455231 147 ntBASIC1.86□□□□□ -2.11
CDH6P55285 AC018868.1-201ENST00000491307 315 ntBASIC1.86□□□□□ -2.11
CDH6P55285 AC022616.6-201ENST00000520479 119 ntBASIC1.86□□□□□ -2.11
CDH6P55285 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH6P55285 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH6P55285 AC026271.5-201ENST00000577873 130 ntBASIC1.86□□□□□ -2.11
CDH6P55285 MIR4999-201ENST00000585029 91 ntBASIC1.86□□□□□ -2.11
CDH6P55285 RPL30P11-203ENST00000598995 310 ntBASIC1.86□□□□□ -2.11
CDH6P55285 AL109918.3-201ENST00000603072 338 ntBASIC1.86□□□□□ -2.11
CDH6P55285 AC073410.2-201ENST00000603240 332 ntBASIC1.86□□□□□ -2.11
CDH6P55285 AP000811.1-201ENST00000603803 651 ntBASIC1.86□□□□□ -2.11
CDH6P55285 AL355816.2-201ENST00000610049 647 ntBASIC1.86□□□□□ -2.11
CDH6P55285 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH6P55285 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH6P55285 ZNF702P-202ENST00000434269 1966 ntBASIC1.86□□□□□ -2.11
CDH6P55285 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDH6P55285 RNA5SP276-201ENST00000362580 94 ntBASIC1.85□□□□□ -2.11
CDH6P55285 RNU6-1010P-201ENST00000362757 107 ntBASIC1.85□□□□□ -2.11
CDH6P55285 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDH6P55285 AL591034.2-201ENST00000402839 359 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AL356432.1-201ENST00000405809 419 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AC016831.2-201ENST00000417179 352 ntBASIC1.85□□□□□ -2.11
CDH6P55285 RPS15AP12-201ENST00000419498 388 ntBASIC1.85□□□□□ -2.11
CDH6P55285 RPS27AP14-201ENST00000422868 454 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AL451074.3-201ENST00000437709 472 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AL353689.1-201ENST00000438895 199 ntBASIC1.85□□□□□ -2.11
CDH6P55285 USP9YP15-201ENST00000442391 422 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AC118469.1-201ENST00000442943 488 ntBASIC1.85□□□□□ -2.11
CDH6P55285 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH6P55285 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH6P55285 AC012308.1-201ENST00000451232 178 ntBASIC1.85□□□□□ -2.11
CDH6P55285 RPL23AP3-201ENST00000453844 468 ntBASIC1.85□□□□□ -2.11
CDH6P55285 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.85□□□□□ -2.11
CDH6P55285 snoU13.15-201ENST00000459407 104 ntBASIC1.85□□□□□ -2.11
CDH6P55285 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH6P55285 HMGB1P35-201ENST00000503360 598 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AC020699.1-201ENST00000505161 445 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.85□□□□□ -2.11
CDH6P55285 Y_RNA.689-201ENST00000516589 107 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AC109329.1-201ENST00000518744 317 ntBASIC1.85□□□□□ -2.11
CDH6P55285 MTND4LP18-201ENST00000526864 291 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH6P55285 AP000873.5-201ENST00000533906 236 ntBASIC1.85□□□□□ -2.11
CDH6P55285 NDUFA5P6-201ENST00000542110 379 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH6P55285 ZNF519P3-201ENST00000557158 1032 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AC092325.1-201ENST00000566449 554 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AC245884.10-201ENST00000597355 337 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AC005034.5-201ENST00000604219 466 ntBASIC1.85□□□□□ -2.11
CDH6P55285 AL136370.1-201ENST00000608166 691 ntBASIC1.85□□□□□ -2.11
CDH6P55285 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
CDH6P55285 AL445523.1-201ENST00000451184 1362 ntBASIC1.85□□□□□ -2.11
CDH6P55285 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDH6P55285 RBBP8P1-201ENST00000449447 1844 ntBASIC1.84□□□□□ -2.11
CDH6P55285 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CDH6P55285 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CDH6P55285 HAUS6P2-201ENST00000433254 2404 ntBASIC1.84□□□□□ -2.11
CDH6P55285 SNORD113-6-201ENST00000363345 75 ntBASIC1.84□□□□□ -2.11
CDH6P55285 RNU1-23P-201ENST00000363361 144 ntBASIC1.84□□□□□ -2.11
CDH6P55285 RNU6-843P-201ENST00000384454 104 ntBASIC1.84□□□□□ -2.11
CDH6P55285 U8.13-201ENST00000390842 128 ntBASIC1.84□□□□□ -2.11
CDH6P55285 SNORA40.18-201ENST00000391200 128 ntBASIC1.84□□□□□ -2.11
CDH6P55285 MIR1294-201ENST00000408503 142 ntBASIC1.84□□□□□ -2.11
CDH6P55285 RNA5SP450-201ENST00000411206 102 ntBASIC1.84□□□□□ -2.11
CDH6P55285 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
CDH6P55285 AC096920.1-201ENST00000423991 241 ntBASIC1.84□□□□□ -2.11
CDH6P55285 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.84□□□□□ -2.11
CDH6P55285 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH6P55285 RPL23AP30-201ENST00000432419 501 ntBASIC1.84□□□□□ -2.11
CDH6P55285 AL583843.1-201ENST00000456070 346 ntBASIC1.84□□□□□ -2.11
CDH6P55285 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH6P55285 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH6P55285 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH6P55285 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH6P55285 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.84□□□□□ -2.11
CDH6P55285 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
CDH6P55285 RNU6-586P-201ENST00000517265 104 ntBASIC1.84□□□□□ -2.11
CDH6P55285 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
CDH6P55285 AL022154.1-201ENST00000604698 785 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms