Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH4P55283 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDH4P55283 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CDH4P55283 SNORD114-19-201ENST00000363072 75 ntBASIC1.98□□□□□ -2.09
CDH4P55283 RNU6-1032P-201ENST00000384100 107 ntBASIC1.98□□□□□ -2.09
CDH4P55283 RNU6-533P-201ENST00000384144 107 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AC127391.1-201ENST00000411737 98 ntBASIC1.98□□□□□ -2.09
CDH4P55283 HIGD1AP15-201ENST00000416198 280 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH4P55283 AC011233.1-201ENST00000422812 283 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH4P55283 AL593851.1-201ENST00000426171 157 ntBASIC1.98□□□□□ -2.09
CDH4P55283 MTND1P12-201ENST00000455231 147 ntBASIC1.98□□□□□ -2.09
CDH4P55283 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH4P55283 AC117503.1-201ENST00000472241 394 ntBASIC1.98□□□□□ -2.09
CDH4P55283 MTAPP1-201ENST00000489154 819 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AC112204.1-201ENST00000502591 103 ntBASIC1.98□□□□□ -2.09
CDH4P55283 RNU7-51P-201ENST00000516560 62 ntBASIC1.98□□□□□ -2.09
CDH4P55283 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.98□□□□□ -2.09
CDH4P55283 EEF1A1P37-201ENST00000522748 715 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AC135279.1-201ENST00000543493 504 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AC091489.2-201ENST00000566263 604 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AC092325.1-201ENST00000566449 554 ntBASIC1.98□□□□□ -2.09
CDH4P55283 NDUFA8P1-201ENST00000605525 367 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AP001486.3-201ENST00000615334 372 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AC008121.3-201ENST00000618726 433 ntBASIC1.98□□□□□ -2.09
CDH4P55283 SDR42E1P4-201ENST00000620894 481 ntBASIC1.98□□□□□ -2.09
CDH4P55283 AC092656.1-203ENST00000624134 423 ntBASIC1.98□□□□□ -2.09
CDH4P55283 SNORA25B-201ENST00000365507 128 ntBASIC1.97□□□□□ -2.09
CDH4P55283 MIR561-201ENST00000385216 97 ntBASIC1.97□□□□□ -2.09
CDH4P55283 RNU6-1140P-201ENST00000410517 106 ntBASIC1.97□□□□□ -2.09
CDH4P55283 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH4P55283 RNA5SP233-201ENST00000459153 113 ntBASIC1.97□□□□□ -2.09
CDH4P55283 MED28P2-201ENST00000475771 317 ntBASIC1.97□□□□□ -2.09
CDH4P55283 RPL7P43-201ENST00000478876 753 ntBASIC1.97□□□□□ -2.09
CDH4P55283 AC007182.2-201ENST00000489251 402 ntBASIC1.97□□□□□ -2.09
CDH4P55283 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.97□□□□□ -2.09
CDH4P55283 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH4P55283 AC107953.1-201ENST00000522216 297 ntBASIC1.97□□□□□ -2.09
CDH4P55283 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH4P55283 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH4P55283 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH4P55283 AC009094.1-201ENST00000564443 426 ntBASIC1.97□□□□□ -2.09
CDH4P55283 AC002400.1-201ENST00000569310 726 ntBASIC1.97□□□□□ -2.09
CDH4P55283 AL031274.2-201ENST00000599419 203 ntBASIC1.97□□□□□ -2.09
CDH4P55283 SNRPGP19-201ENST00000603826 189 ntBASIC1.97□□□□□ -2.09
CDH4P55283 AL158032.1-201ENST00000605401 106 ntBASIC1.97□□□□□ -2.09
CDH4P55283 AC093788.1-201ENST00000609356 927 ntBASIC1.97□□□□□ -2.09
CDH4P55283 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH4P55283 AL162373.1-201ENST00000620433 407 ntBASIC1.97□□□□□ -2.09
CDH4P55283 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
CDH4P55283 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CDH4P55283 SNORA75B-201ENST00000384053 137 ntBASIC1.96□□□□□ -2.1
CDH4P55283 AL591034.2-201ENST00000402839 359 ntBASIC1.96□□□□□ -2.1
CDH4P55283 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH4P55283 EIF1AXP1-201ENST00000419267 435 ntBASIC1.96□□□□□ -2.1
CDH4P55283 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.96□□□□□ -2.1
CDH4P55283 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH4P55283 MTND5P2-201ENST00000442927 1142 ntBASIC1.96□□□□□ -2.1
CDH4P55283 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.96□□□□□ -2.1
CDH4P55283 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.96□□□□□ -2.1
CDH4P55283 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH4P55283 RNU6-1129P-201ENST00000515964 104 ntBASIC1.96□□□□□ -2.1
CDH4P55283 SNORA48.11-201ENST00000517015 89 ntBASIC1.96□□□□□ -2.1
CDH4P55283 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH4P55283 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CDH4P55283 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.96□□□□□ -2.1
CDH4P55283 AP003122.4-201ENST00000530980 758 ntBASIC1.96□□□□□ -2.1
CDH4P55283 OR5B19P-201ENST00000531766 928 ntBASIC1.96□□□□□ -2.1
CDH4P55283 MIR4287-201ENST00000579398 78 ntBASIC1.96□□□□□ -2.1
CDH4P55283 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
CDH4P55283 AC008749.1-201ENST00000597650 306 ntBASIC1.96□□□□□ -2.1
CDH4P55283 RPL30P11-203ENST00000598995 310 ntBASIC1.96□□□□□ -2.1
CDH4P55283 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH4P55283 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CDH4P55283 AC104010.1-201ENST00000616889 150 ntBASIC1.96□□□□□ -2.1
CDH4P55283 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDH4P55283 RBBP8P1-201ENST00000449447 1844 ntBASIC1.96□□□□□ -2.1
CDH4P55283 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CDH4P55283 HSPE1P11-201ENST00000339579 310 ntBASIC1.95□□□□□ -2.1
CDH4P55283 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CDH4P55283 MIR95-201ENST00000385072 81 ntBASIC1.95□□□□□ -2.1
CDH4P55283 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CDH4P55283 U8.13-201ENST00000390842 128 ntBASIC1.95□□□□□ -2.1
CDH4P55283 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDH4P55283 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDH4P55283 MIR1289-2-201ENST00000408360 111 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH4P55283 AL365338.1-201ENST00000422282 858 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH4P55283 AC010099.3-201ENST00000423896 409 ntBASIC1.95□□□□□ -2.1
CDH4P55283 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.95□□□□□ -2.1
CDH4P55283 AL365184.2-201ENST00000431139 435 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH4P55283 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.95□□□□□ -2.1
CDH4P55283 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.95□□□□□ -2.1
CDH4P55283 snoU109.2-201ENST00000459316 135 ntBASIC1.95□□□□□ -2.1
CDH4P55283 RPL21P99-201ENST00000480369 423 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms