Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC008716.1-201ENST00000511084 513 ntBASIC2.68□□□□□ -1.98
PDX1P52945 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.68□□□□□ -1.98
PDX1P52945 RAC1P5-201ENST00000512182 576 ntBASIC2.68□□□□□ -1.98
PDX1P52945 RNU2-69P-201ENST00000516061 100 ntBASIC2.68□□□□□ -1.98
PDX1P52945 RNU6-1038P-201ENST00000516516 104 ntBASIC2.68□□□□□ -1.98
PDX1P52945 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.68□□□□□ -1.98
PDX1P52945 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.68□□□□□ -1.98
PDX1P52945 MTND1P35-201ENST00000526739 508 ntBASIC2.68□□□□□ -1.98
PDX1P52945 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.68□□□□□ -1.98
PDX1P52945 AC234778.2-201ENST00000566241 354 ntBASIC2.68□□□□□ -1.98
PDX1P52945 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.68□□□□□ -1.98
PDX1P52945 AC012119.1-201ENST00000603184 222 ntBASIC2.68□□□□□ -1.98
PDX1P52945 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PDX1P52945 RMST_3.1-201ENST00000611651 109 ntBASIC2.68□□□□□ -1.98
PDX1P52945 AC092794.1-201ENST00000612734 582 ntBASIC2.68□□□□□ -1.98
PDX1P52945 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDX1P52945 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.68□□□□□ -1.98
PDX1P52945 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PDX1P52945 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PDX1P52945 AC091564.4-201ENST00000533934 2194 ntBASIC2.67□□□□□ -1.98
PDX1P52945 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PDX1P52945 AC108206.1-201ENST00000570186 4159 ntBASIC2.67□□□□□ -1.98
PDX1P52945 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PDX1P52945 RPL9P7-201ENST00000330965 580 ntBASIC2.67□□□□□ -1.98
PDX1P52945 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PDX1P52945 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PDX1P52945 MIR412-201ENST00000362142 91 ntBASIC2.67□□□□□ -1.98
PDX1P52945 Y_RNA.89-201ENST00000363031 102 ntBASIC2.67□□□□□ -1.98
PDX1P52945 RNU6-799P-201ENST00000363567 107 ntBASIC2.67□□□□□ -1.98
PDX1P52945 RNY3P3-201ENST00000363816 102 ntBASIC2.67□□□□□ -1.98
PDX1P52945 RNU6-534P-201ENST00000364877 106 ntBASIC2.67□□□□□ -1.98
PDX1P52945 RNU6-898P-201ENST00000365627 104 ntBASIC2.67□□□□□ -1.98
PDX1P52945 MIR196B-201ENST00000384852 84 ntBASIC2.67□□□□□ -1.98
PDX1P52945 MIR518D-201ENST00000385014 87 ntBASIC2.67□□□□□ -1.98
PDX1P52945 AL356057.2-201ENST00000403318 432 ntBASIC2.67□□□□□ -1.98
PDX1P52945 RPS4XP7-201ENST00000406274 780 ntBASIC2.67□□□□□ -1.98
PDX1P52945 RNU2-3P-201ENST00000410144 191 ntBASIC2.67□□□□□ -1.98
PDX1P52945 RNA5SP21-201ENST00000410917 96 ntBASIC2.67□□□□□ -1.98
PDX1P52945 Y_RNA.623-201ENST00000411128 95 ntBASIC2.67□□□□□ -1.98
PDX1P52945 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.67□□□□□ -1.98
PDX1P52945 BMS1P22-201ENST00000414726 313 ntBASIC2.67□□□□□ -1.98
PDX1P52945 AC009414.1-201ENST00000427200 443 ntBASIC2.67□□□□□ -1.98
PDX1P52945 HMGB1P9-201ENST00000429856 646 ntBASIC2.67□□□□□ -1.98
PDX1P52945 AC098831.1-201ENST00000440661 216 ntBASIC2.67□□□□□ -1.98
PDX1P52945 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.67□□□□□ -1.98
PDX1P52945 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.67□□□□□ -1.98
PDX1P52945 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.67□□□□□ -1.98
PDX1P52945 TRBV1-201ENST00000476502 284 ntBASIC2.67□□□□□ -1.98
PDX1P52945 RPL21P93-201ENST00000480465 489 ntBASIC2.67□□□□□ -1.98
PDX1P52945 MTAPP1-201ENST00000489154 819 ntBASIC2.67□□□□□ -1.98
PDX1P52945 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.67□□□□□ -1.98
PDX1P52945 RN7SKP282-201ENST00000516824 299 ntBASIC2.67□□□□□ -1.98
PDX1P52945 AC007536.1-201ENST00000533382 349 ntBASIC2.67□□□□□ -1.98
PDX1P52945 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.67□□□□□ -1.98
PDX1P52945 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.67□□□□□ -1.98
PDX1P52945 MIR4435-1-201ENST00000582552 80 ntBASIC2.67□□□□□ -1.98
PDX1P52945 AL627309.6-201ENST00000606857 840 ntBASIC2.67□□□□□ -1.98
PDX1P52945 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.67□□□□□ -1.98
PDX1P52945 AP003122.6-201ENST00000623831 495 ntBASIC2.67□□□□□ -1.98
PDX1P52945 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PDX1P52945 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PDX1P52945 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.67□□□□□ -1.98
PDX1P52945 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
PDX1P52945 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PDX1P52945 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.66□□□□□ -1.98
PDX1P52945 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PDX1P52945 RNU6-38P-201ENST00000384085 107 ntBASIC2.66□□□□□ -1.98
PDX1P52945 MIR512-1-201ENST00000384913 84 ntBASIC2.66□□□□□ -1.98
PDX1P52945 MIR514A2-201ENST00000385131 88 ntBASIC2.66□□□□□ -1.98
PDX1P52945 MIR514A3-201ENST00000385132 88 ntBASIC2.66□□□□□ -1.98
PDX1P52945 MIR181B1-201ENST00000385240 110 ntBASIC2.66□□□□□ -1.98
PDX1P52945 AL592114.1-201ENST00000403842 483 ntBASIC2.66□□□□□ -1.98
PDX1P52945 BTF3P7-201ENST00000407097 488 ntBASIC2.66□□□□□ -1.98
PDX1P52945 OR9R1P-201ENST00000412200 877 ntBASIC2.66□□□□□ -1.98
PDX1P52945 CYCSP33-201ENST00000414485 327 ntBASIC2.66□□□□□ -1.98
PDX1P52945 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.66□□□□□ -1.98
PDX1P52945 AC016831.2-201ENST00000417179 352 ntBASIC2.66□□□□□ -1.98
PDX1P52945 AL353621.1-201ENST00000418219 243 ntBASIC2.66□□□□□ -1.98
PDX1P52945 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.66□□□□□ -1.98
PDX1P52945 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.66□□□□□ -1.98
PDX1P52945 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.66□□□□□ -1.98
PDX1P52945 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.66□□□□□ -1.98
PDX1P52945 HMGN2P10-201ENST00000448085 265 ntBASIC2.66□□□□□ -1.98
PDX1P52945 RNU6-333P-201ENST00000459117 107 ntBASIC2.66□□□□□ -1.98
PDX1P52945 RPS27P26-201ENST00000494583 239 ntBASIC2.66□□□□□ -1.98
PDX1P52945 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.66□□□□□ -1.98
PDX1P52945 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.66□□□□□ -1.98
PDX1P52945 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.66□□□□□ -1.98
PDX1P52945 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.66□□□□□ -1.98
PDX1P52945 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.66□□□□□ -1.98
PDX1P52945 MIR4782-201ENST00000577987 79 ntBASIC2.66□□□□□ -1.98
PDX1P52945 LRRC37A5P-203ENST00000580181 585 ntBASIC2.66□□□□□ -1.98
PDX1P52945 AC010525.2-201ENST00000590920 195 ntBASIC2.66□□□□□ -1.98
PDX1P52945 AC004852.3-201ENST00000614131 326 ntBASIC2.66□□□□□ -1.98
PDX1P52945 AC007014.2-201ENST00000615581 479 ntBASIC2.66□□□□□ -1.98
PDX1P52945 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.66□□□□□ -1.98
PDX1P52945 AC022418.1-201ENST00000624118 445 ntBASIC2.66□□□□□ -1.98
PDX1P52945 AL160394.1-201ENST00000624765 724 ntBASIC2.66□□□□□ -1.98
PDX1P52945 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.66□□□□□ -1.98
PDX1P52945 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms