Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.12□□□□□ -2.07
MSH6P52701 AC135279.1-201ENST00000543493 504 ntBASIC2.12□□□□□ -2.07
MSH6P52701 ELOCP32-201ENST00000548625 324 ntBASIC2.12□□□□□ -2.07
MSH6P52701 ANP32BP3-201ENST00000559213 706 ntBASIC2.12□□□□□ -2.07
MSH6P52701 AC024614.2-201ENST00000577584 372 ntBASIC2.12□□□□□ -2.07
MSH6P52701 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.12□□□□□ -2.07
MSH6P52701 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.12□□□□□ -2.07
MSH6P52701 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.12□□□□□ -2.07
MSH6P52701 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.12□□□□□ -2.07
MSH6P52701 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.12□□□□□ -2.07
MSH6P52701 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MSH6P52701 NDUFS5P1-201ENST00000405668 289 ntBASIC2.11□□□□□ -2.07
MSH6P52701 RPL26P27-201ENST00000414397 437 ntBASIC2.11□□□□□ -2.07
MSH6P52701 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.11□□□□□ -2.07
MSH6P52701 AL353777.1-201ENST00000425552 326 ntBASIC2.11□□□□□ -2.07
MSH6P52701 AC104651.1-201ENST00000427559 735 ntBASIC2.11□□□□□ -2.07
MSH6P52701 Z80107.1-201ENST00000436830 412 ntBASIC2.11□□□□□ -2.07
MSH6P52701 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.11□□□□□ -2.07
MSH6P52701 MTATP6P7-201ENST00000453315 681 ntBASIC2.11□□□□□ -2.07
MSH6P52701 AL139109.1-201ENST00000455491 297 ntBASIC2.11□□□□□ -2.07
MSH6P52701 AC026801.1-201ENST00000497178 464 ntBASIC2.11□□□□□ -2.07
MSH6P52701 RNU5F-8P-201ENST00000515941 111 ntBASIC2.11□□□□□ -2.07
MSH6P52701 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.11□□□□□ -2.07
MSH6P52701 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.11□□□□□ -2.07
MSH6P52701 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.11□□□□□ -2.07
MSH6P52701 AC123904.2-201ENST00000548059 300 ntBASIC2.11□□□□□ -2.07
MSH6P52701 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.11□□□□□ -2.07
MSH6P52701 AC021739.1-201ENST00000559631 174 ntBASIC2.11□□□□□ -2.07
MSH6P52701 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.11□□□□□ -2.07
MSH6P52701 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.11□□□□□ -2.07
MSH6P52701 AC007151.1-201ENST00000572774 483 ntBASIC2.11□□□□□ -2.07
MSH6P52701 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.11□□□□□ -2.07
MSH6P52701 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.11□□□□□ -2.07
MSH6P52701 MIR3117-201ENST00000584034 78 ntBASIC2.11□□□□□ -2.07
MSH6P52701 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.11□□□□□ -2.07
MSH6P52701 AL589743.7-201ENST00000612637 233 ntBASIC2.11□□□□□ -2.07
MSH6P52701 uc_338.12-201ENST00000616344 181 ntBASIC2.11□□□□□ -2.07
MSH6P52701 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.11□□□□□ -2.07
MSH6P52701 RNU1-93P-201ENST00000364704 169 ntBASIC2.1□□□□□ -2.07
MSH6P52701 RNY3P13-201ENST00000365542 102 ntBASIC2.1□□□□□ -2.07
MSH6P52701 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
MSH6P52701 RNU4-72P-201ENST00000410754 173 ntBASIC2.1□□□□□ -2.07
MSH6P52701 RNU2-62P-201ENST00000410868 191 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.1□□□□□ -2.07
MSH6P52701 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.1□□□□□ -2.07
MSH6P52701 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.1□□□□□ -2.07
MSH6P52701 RPS27AP14-201ENST00000422868 454 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.1□□□□□ -2.07
MSH6P52701 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.1□□□□□ -2.07
MSH6P52701 IPO7P1-201ENST00000442031 636 ntBASIC2.1□□□□□ -2.07
MSH6P52701 COX6CP12-201ENST00000446748 202 ntBASIC2.1□□□□□ -2.07
MSH6P52701 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.1□□□□□ -2.07
MSH6P52701 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.1□□□□□ -2.07
MSH6P52701 AC022493.1-201ENST00000492984 337 ntBASIC2.1□□□□□ -2.07
MSH6P52701 EIF4EP3-201ENST00000498782 656 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AC022447.1-201ENST00000515358 464 ntBASIC2.1□□□□□ -2.07
MSH6P52701 RN7SKP265-201ENST00000516448 223 ntBASIC2.1□□□□□ -2.07
MSH6P52701 RNU6-678P-201ENST00000516832 109 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.1□□□□□ -2.07
MSH6P52701 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.1□□□□□ -2.07
MSH6P52701 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.1□□□□□ -2.07
MSH6P52701 AC005261.5-201ENST00000596280 355 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AL358072.1-201ENST00000604156 575 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AC108747.1-201ENST00000609508 535 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AL133216.2-202ENST00000634512 349 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AL137003.2-201ENST00000606924 2538 ntBASIC2.1□□□□□ -2.07
MSH6P52701 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
MSH6P52701 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.1□□□□□ -2.07
MSH6P52701 RNU6-188P-201ENST00000364207 107 ntBASIC2.1□□□□□ -2.07
MSH6P52701 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
MSH6P52701 RNU6-342P-201ENST00000384521 104 ntBASIC2.1□□□□□ -2.07
MSH6P52701 U8.14-201ENST00000390843 143 ntBASIC2.1□□□□□ -2.07
MSH6P52701 ELOCP17-201ENST00000414751 326 ntBASIC2.1□□□□□ -2.07
MSH6P52701 HMGN2P10-201ENST00000448085 265 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.1□□□□□ -2.07
MSH6P52701 RPL39P36-201ENST00000490784 156 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AC139453.3-201ENST00000493276 369 ntBASIC2.1□□□□□ -2.07
MSH6P52701 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.1□□□□□ -2.07
MSH6P52701 AC116347.2-201ENST00000514912 523 ntBASIC2.1□□□□□ -2.07
MSH6P52701 SNORA31.18-201ENST00000517043 134 ntBASIC2.1□□□□□ -2.07
MSH6P52701 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
MSH6P52701 AL137100.2-201ENST00000555786 315 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AC091489.2-201ENST00000566263 604 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AL391813.1-201ENST00000603098 260 ntBASIC2.1□□□□□ -2.07
MSH6P52701 AL359851.1-201ENST00000569460 4997 ntBASIC2.09□□□□□ -2.08
MSH6P52701 AC010329.5-201ENST00000623497 2174 ntBASIC2.09□□□□□ -2.08
MSH6P52701 NACAP2-201ENST00000318548 624 ntBASIC2.09□□□□□ -2.08
MSH6P52701 RNU6-500P-201ENST00000362349 107 ntBASIC2.09□□□□□ -2.08
MSH6P52701 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.09□□□□□ -2.08
MSH6P52701 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.09□□□□□ -2.08
MSH6P52701 RAC1P6-201ENST00000423911 575 ntBASIC2.09□□□□□ -2.08
MSH6P52701 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
MSH6P52701 RPS6P15-201ENST00000431996 751 ntBASIC2.09□□□□□ -2.08
MSH6P52701 RPL36AP53-201ENST00000432891 316 ntBASIC2.09□□□□□ -2.08
MSH6P52701 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.09□□□□□ -2.08
MSH6P52701 ATP5J2P3-201ENST00000451550 258 ntBASIC2.09□□□□□ -2.08
MSH6P52701 SNORD97-201ENST00000459187 142 ntBASIC2.09□□□□□ -2.08
MSH6P52701 RPL37P6-201ENST00000460682 294 ntBASIC2.09□□□□□ -2.08
MSH6P52701 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.09□□□□□ -2.08
MSH6P52701 AC107934.1-201ENST00000522215 217 ntBASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms