Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AF038458.1-201ENST00000588406 262 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 AL391646.1-201ENST00000603860 190 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 AC112220.3-201ENST00000605502 502 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 AC107952.2-201ENST00000606048 486 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.75□□□□□ -2.29
GTF2A1P52655 AC012360.2-201ENST00000609349 391 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
GTF2A1P52655 AC013470.4-201ENST00000619978 986 ntBASIC0.75□□□□□ -2.29
GTF2A1P52655 Y_RNA.25-201ENST00000362528 102 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 RNU6-53P-201ENST00000365367 106 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 RNU6-1274P-201ENST00000384557 107 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 AL022400.1-201ENST00000423946 935 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.74□□□□□ -2.29
GTF2A1P52655 AL365400.1-201ENST00000431854 640 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 AC114878.1-201ENST00000441166 358 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 AL096829.2-201ENST00000446582 742 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 ARL2BPP4-201ENST00000506854 471 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 SCARNA16.2-201ENST00000516520 172 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.74□□□□□ -2.29
GTF2A1P52655 AC136619.2-201ENST00000563361 631 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 SUB1P4-201ENST00000566062 339 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.74□□□□□ -2.29
GTF2A1P52655 FAM71BP1-201ENST00000604431 523 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 AL583856.2-201ENST00000606298 543 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 AC025754.2-201ENST00000606491 432 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 AC010975.3-201ENST00000618727 978 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 MIR8065-201ENST00000620577 100 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 U6.99-201ENST00000637524 83 ntBASIC0.74□□□□□ -2.29
GTF2A1P52655 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.73□□□□□ -2.29
GTF2A1P52655 AL391987.6-201ENST00000305671 199 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 RNU6-216P-201ENST00000363282 104 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 RNU6-188P-201ENST00000364207 107 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 SNORA4.1-201ENST00000364263 144 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 RPL23AP32-201ENST00000395315 459 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 MRPL35P1-201ENST00000404272 572 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.73□□□□□ -2.29
GTF2A1P52655 AL158050.1-201ENST00000416077 457 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 AC027644.1-201ENST00000419595 298 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.73□□□□□ -2.29
GTF2A1P52655 AL035666.1-201ENST00000446195 348 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 MTND1P9-201ENST00000453775 944 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.73□□□□□ -2.29
GTF2A1P52655 COX6CP14-201ENST00000469580 174 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.73□□□□□ -2.29
GTF2A1P52655 AC004817.2-201ENST00000561794 651 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.73□□□□□ -2.29
GTF2A1P52655 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 AP005136.1-201ENST00000579765 429 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.73□□□□□ -2.29
GTF2A1P52655 AP002906.1-201ENST00000603405 233 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 AC098614.4-201ENST00000607601 462 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 AC009269.6-201ENST00000621778 588 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.73□□□□□ -2.29
GTF2A1P52655 AC100821.1-201ENST00000523153 2479 ntBASIC0.73□□□□□ -2.29
GTF2A1P52655 SNORD33-201ENST00000362761 85 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 RNU4-27P-201ENST00000410889 139 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 USP9YP33-201ENST00000412220 421 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.72□□□□□ -2.29
GTF2A1P52655 MTND4LP7-201ENST00000431728 294 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 MTCO3P5-201ENST00000433620 714 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 JTBP1-201ENST00000441314 247 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 MTCO3P45-201ENST00000443036 613 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 GXYLT1P1-201ENST00000446657 490 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.72□□□□□ -2.29
GTF2A1P52655 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.72□□□□□ -2.29
GTF2A1P52655 AC110760.3-202ENST00000515177 371 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 RNU6-551P-201ENST00000516661 103 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 RNU6-965P-201ENST00000516721 96 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 AP001189.2-201ENST00000527320 189 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.72□□□□□ -2.29
GTF2A1P52655 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.72□□□□□ -2.29
GTF2A1P52655 AC022616.8-201ENST00000533569 253 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.72□□□□□ -2.29
GTF2A1P52655 AC015712.3-201ENST00000559380 164 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.72□□□□□ -2.29
GTF2A1P52655 AC012065.4-201ENST00000602445 679 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 AC021171.1-201ENST00000603137 706 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.72□□□□□ -2.29
GTF2A1P52655 AL353997.5-201ENST00000618886 171 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 AC008993.2-201ENST00000631744 806 ntBASIC0.72□□□□□ -2.29
GTF2A1P52655 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
GTF2A1P52655 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
GTF2A1P52655 MIR378A-201ENST00000362177 66 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 SNORD114-19-201ENST00000363072 75 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 RNU6-114P-201ENST00000384704 105 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 MIR532-201ENST00000385025 91 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.71□□□□□ -2.3
GTF2A1P52655 MTND1P21-201ENST00000412991 285 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 TPMTP2-201ENST00000414372 726 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 AC009518.2-201ENST00000418056 731 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.71□□□□□ -2.3
GTF2A1P52655 GTF2IP3-201ENST00000433887 494 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 RPL30P1-201ENST00000488676 339 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 AC023194.1-201ENST00000493084 308 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 AC145146.1-201ENST00000496370 254 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 AC108210.2-201ENST00000503681 201 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 AC114981.1-201ENST00000503897 678 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms