Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.03□□□□□ -1.92
CLCN3P51790 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.03□□□□□ -1.92
CLCN3P51790 NACAP3-201ENST00000552100 481 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCN3P51790 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.03□□□□□ -1.92
CLCN3P51790 OR4G1P-203ENST00000641984 1631 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 MTND4P12-201ENST00000498999 1377 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLCN3P51790 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLCN3P51790 RNU6-859P-201ENST00000362728 107 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 RNU6-884P-201ENST00000363889 107 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLCN3P51790 RNU6-38P-201ENST00000384085 107 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 MIR196B-201ENST00000384852 84 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 RNU1-101P-201ENST00000391171 127 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AL356057.3-201ENST00000402607 340 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 MTCO3P46-201ENST00000425787 232 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCN3P51790 AL513043.1-201ENST00000439124 535 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 MTND3P16-201ENST00000452205 344 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AC092001.1-201ENST00000453012 261 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.02□□□□□ -1.93
CLCN3P51790 AL162395.1-201ENST00000457882 422 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 RNU6-333P-201ENST00000459117 107 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCN3P51790 AC025465.4-201ENST00000513422 638 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 SNORA31.21-201ENST00000517180 77 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AC023050.3-201ENST00000541142 333 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.02□□□□□ -1.93
CLCN3P51790 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCN3P51790 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCN3P51790 AL670379.4-201ENST00000605279 254 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 RNU6-89P-201ENST00000606519 100 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AC090115.4-201ENST00000609970 188 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AL161629.2-201ENST00000615347 275 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 AL359697.1-201ENST00000624879 587 ntBASIC3.02□□□□□ -1.93
CLCN3P51790 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.02□□□□□ -1.93
CLCN3P51790 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.01□□□□□ -1.93
CLCN3P51790 AC091564.4-201ENST00000533934 2194 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AC008669.1-201ENST00000565823 2178 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 MAPK10-362ENST00000641864 4484 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCN3P51790 NACAP2-201ENST00000318548 624 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 RNU6-845P-201ENST00000362578 103 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 Y_RNA.61-201ENST00000362835 102 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 RNU6-694P-201ENST00000364071 147 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 Y_RNA.231-201ENST00000364358 102 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 MIR9-1-201ENST00000385198 89 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 RNU6-1009P-201ENST00000390996 107 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 RNA5SP111-201ENST00000411386 101 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 EEF1A1P40-201ENST00000412883 573 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AL451074.5-201ENST00000415894 435 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCN3P51790 AL513185.2-201ENST00000425543 193 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AC098614.2-201ENST00000426040 255 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AL365496.1-201ENST00000426885 215 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 MYL8P-204ENST00000431574 518 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCN3P51790 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.01□□□□□ -1.93
CLCN3P51790 RPL26P9-201ENST00000457466 433 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AL031183.1-201ENST00000457667 207 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCN3P51790 MTCO3P9-201ENST00000506989 781 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AC009902.1-201ENST00000519351 183 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AC078814.3-201ENST00000553036 491 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCN3P51790 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.01□□□□□ -1.93
CLCN3P51790 MIR548AC-201ENST00000585049 88 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AC007938.3-201ENST00000604965 623 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AC009233.1-201ENST00000616477 371 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AL136221.1-201ENST00000621449 509 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 AC090617.10-201ENST00000624308 134 ntBASIC3.01□□□□□ -1.93
CLCN3P51790 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLCN3P51790 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLCN3P51790 MTND4P35-201ENST00000604257 1375 ntBASIC3□□□□□ -1.93
CLCN3P51790 AC110774.1-201ENST00000623567 2018 ntBASIC3□□□□□ -1.93
CLCN3P51790 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CLCN3P51790 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CLCN3P51790 RPL9P7-201ENST00000330965 580 ntBASIC3□□□□□ -1.93
CLCN3P51790 RNU6-799P-201ENST00000363567 107 ntBASIC3□□□□□ -1.93
CLCN3P51790 Y_RNA.509-201ENST00000384506 99 ntBASIC3□□□□□ -1.93
CLCN3P51790 RNU6-332P-201ENST00000391193 108 ntBASIC3□□□□□ -1.93
CLCN3P51790 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLCN3P51790 RNU6-1025P-201ENST00000410629 104 ntBASIC3□□□□□ -1.93
CLCN3P51790 OFD1P1Y-201ENST00000411756 1225 ntBASIC3□□□□□ -1.93
CLCN3P51790 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3□□□□□ -1.93
CLCN3P51790 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLCN3P51790 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3□□□□□ -1.93
CLCN3P51790 SKA2P1-201ENST00000425592 390 ntBASIC3□□□□□ -1.93
CLCN3P51790 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLCN3P51790 MTND3P23-201ENST00000431980 347 ntBASIC3□□□□□ -1.93
CLCN3P51790 AC112220.1-201ENST00000434628 355 ntBASIC3□□□□□ -1.93
CLCN3P51790 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3□□□□□ -1.93
CLCN3P51790 NDUFB1P2-201ENST00000449477 176 ntBASIC3□□□□□ -1.93
CLCN3P51790 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3□□□□□ -1.93
CLCN3P51790 AC090525.1-201ENST00000479116 478 ntBASIC3□□□□□ -1.93
CLCN3P51790 AC091885.1-201ENST00000506658 268 ntBASIC3□□□□□ -1.93
CLCN3P51790 CCDC34P1-201ENST00000507441 517 ntBASIC3□□□□□ -1.93
CLCN3P51790 FGF7P4-201ENST00000509595 295 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms