Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USP11P51784 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP11P51784 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
USP11P51784 Y_RNA.33-201ENST00000362591 102 ntBASIC4.5□□□□□ -1.69
USP11P51784 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.5□□□□□ -1.69
USP11P51784 RNU6-628P-201ENST00000410675 107 ntBASIC4.5□□□□□ -1.69
USP11P51784 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.5□□□□□ -1.69
USP11P51784 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.5□□□□□ -1.69
USP11P51784 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.5□□□□□ -1.69
USP11P51784 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.5□□□□□ -1.69
USP11P51784 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.5□□□□□ -1.69
USP11P51784 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.5□□□□□ -1.69
USP11P51784 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.5□□□□□ -1.69
USP11P51784 AC106785.1-201ENST00000565935 262 ntBASIC4.5□□□□□ -1.69
USP11P51784 AC023824.2-201ENST00000566185 400 ntBASIC4.5□□□□□ -1.69
USP11P51784 AC053481.4-201ENST00000583164 216 ntBASIC4.5□□□□□ -1.69
USP11P51784 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.5□□□□□ -1.69
USP11P51784 AC240442.1-201ENST00000616055 283 ntBASIC4.5□□□□□ -1.69
USP11P51784 MIR6500-201ENST00000622700 86 ntBASIC4.5□□□□□ -1.69
USP11P51784 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
USP11P51784 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP11P51784 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.5□□□□□ -1.69
USP11P51784 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP11P51784 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.5□□□□□ -1.69
USP11P51784 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP11P51784 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP11P51784 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.49□□□□□ -1.69
USP11P51784 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.49□□□□□ -1.69
USP11P51784 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP11P51784 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
USP11P51784 AC009812.4-201ENST00000569134 1805 ntBASIC4.49□□□□□ -1.69
USP11P51784 SNORD113-8-201ENST00000363497 74 ntBASIC4.49□□□□□ -1.69
USP11P51784 RNU6-395P-201ENST00000365662 106 ntBASIC4.49□□□□□ -1.69
USP11P51784 RNU6-47P-201ENST00000383866 107 ntBASIC4.49□□□□□ -1.69
USP11P51784 RNU6-937P-201ENST00000384325 106 ntBASIC4.49□□□□□ -1.69
USP11P51784 RNU6-837P-201ENST00000391056 108 ntBASIC4.49□□□□□ -1.69
USP11P51784 SNORA48.7-201ENST00000391302 135 ntBASIC4.49□□□□□ -1.69
USP11P51784 MTCYBP2-201ENST00000407745 171 ntBASIC4.49□□□□□ -1.69
USP11P51784 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.49□□□□□ -1.69
USP11P51784 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.49□□□□□ -1.69
USP11P51784 HMGB1P37-201ENST00000439613 609 ntBASIC4.49□□□□□ -1.69
USP11P51784 RN7SKP210-201ENST00000459176 261 ntBASIC4.49□□□□□ -1.69
USP11P51784 AC034236.1-201ENST00000469891 373 ntBASIC4.49□□□□□ -1.69
USP11P51784 RPL31P61-201ENST00000496160 376 ntBASIC4.49□□□□□ -1.69
USP11P51784 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
USP11P51784 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.49□□□□□ -1.69
USP11P51784 AC022559.1-201ENST00000520905 205 ntBASIC4.49□□□□□ -1.69
USP11P51784 AC025755.1-201ENST00000521306 278 ntBASIC4.49□□□□□ -1.69
USP11P51784 AC104581.2-201ENST00000572227 430 ntBASIC4.49□□□□□ -1.69
USP11P51784 MIR4644-201ENST00000579929 84 ntBASIC4.49□□□□□ -1.69
USP11P51784 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.49□□□□□ -1.69
USP11P51784 AL606490.9-201ENST00000603331 271 ntBASIC4.49□□□□□ -1.69
USP11P51784 AP000787.2-201ENST00000604432 568 ntBASIC4.49□□□□□ -1.69
USP11P51784 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP11P51784 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
USP11P51784 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP11P51784 NCAPGP1-201ENST00000505112 1814 ntBASIC4.49□□□□□ -1.69
USP11P51784 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP11P51784 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP11P51784 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP11P51784 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
USP11P51784 MIR301A-201ENST00000385261 86 ntBASIC4.48□□□□□ -1.69
USP11P51784 RNU6-1025P-201ENST00000410629 104 ntBASIC4.48□□□□□ -1.69
USP11P51784 Y_RNA.626-201ENST00000411288 95 ntBASIC4.48□□□□□ -1.69
USP11P51784 AL513331.1-201ENST00000411908 397 ntBASIC4.48□□□□□ -1.69
USP11P51784 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.48□□□□□ -1.69
USP11P51784 AL158156.1-201ENST00000422509 473 ntBASIC4.48□□□□□ -1.69
USP11P51784 FTH1P6-201ENST00000430768 320 ntBASIC4.48□□□□□ -1.69
USP11P51784 RNU7-87P-201ENST00000459343 62 ntBASIC4.48□□□□□ -1.69
USP11P51784 RPS29P26-201ENST00000477483 171 ntBASIC4.48□□□□□ -1.69
USP11P51784 RNU6-346P-201ENST00000516288 111 ntBASIC4.48□□□□□ -1.69
USP11P51784 RNU6-1012P-201ENST00000516606 109 ntBASIC4.48□□□□□ -1.69
USP11P51784 RNU6-612P-201ENST00000516909 102 ntBASIC4.48□□□□□ -1.69
USP11P51784 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.48□□□□□ -1.69
USP11P51784 AC091144.1-201ENST00000519573 138 ntBASIC4.48□□□□□ -1.69
USP11P51784 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP11P51784 AC084851.1-201ENST00000529105 249 ntBASIC4.48□□□□□ -1.69
USP11P51784 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.48□□□□□ -1.69
USP11P51784 GNRHR2P1-201ENST00000555315 631 ntBASIC4.48□□□□□ -1.69
USP11P51784 SRGNP1-201ENST00000603392 451 ntBASIC4.48□□□□□ -1.69
USP11P51784 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.48□□□□□ -1.69
USP11P51784 MZT1P2-201ENST00000604387 248 ntBASIC4.48□□□□□ -1.69
USP11P51784 AL161798.1-201ENST00000604630 131 ntBASIC4.48□□□□□ -1.69
USP11P51784 Y_RNA.772-201ENST00000606692 102 ntBASIC4.48□□□□□ -1.69
USP11P51784 AC011476.5-201ENST00000615594 130 ntBASIC4.48□□□□□ -1.69
USP11P51784 MIR6875-201ENST00000617506 72 ntBASIC4.48□□□□□ -1.69
USP11P51784 AC090617.7-201ENST00000623952 126 ntBASIC4.48□□□□□ -1.69
USP11P51784 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.48□□□□□ -1.69
USP11P51784 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP11P51784 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.48□□□□□ -1.69
USP11P51784 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP11P51784 AC007785.2-201ENST00000598627 1916 ntBASIC4.48□□□□□ -1.69
USP11P51784 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.48□□□□□ -1.69
USP11P51784 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP11P51784 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP11P51784 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.47□□□□□ -1.69
USP11P51784 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP11P51784 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.47□□□□□ -1.69
USP11P51784 RN7SKP280-201ENST00000364196 304 ntBASIC4.47□□□□□ -1.69
USP11P51784 RNY4P28-201ENST00000365281 93 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms