Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU5E-5P-201ENST00000365379 116 ntBASIC2.05□□□□□ -2.08
CASP4P49662 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CASP4P49662 RNU2-8P-201ENST00000410727 190 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.05□□□□□ -2.08
CASP4P49662 MTND4P20-201ENST00000424125 869 ntBASIC2.05□□□□□ -2.08
CASP4P49662 RPS24P1-201ENST00000438550 371 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.05□□□□□ -2.08
CASP4P49662 USP9YP12-201ENST00000450481 570 ntBASIC2.05□□□□□ -2.08
CASP4P49662 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.05□□□□□ -2.08
CASP4P49662 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC112771.1-201ENST00000463581 102 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC068781.1-201ENST00000488231 618 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC117522.2-201ENST00000510049 657 ntBASIC2.05□□□□□ -2.08
CASP4P49662 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
CASP4P49662 AP003181.2-201ENST00000528941 181 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC022878.1-201ENST00000530684 149 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.05□□□□□ -2.08
CASP4P49662 CBX3P7-201ENST00000532876 502 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.05□□□□□ -2.08
CASP4P49662 AC110588.1-201ENST00000559699 137 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.05□□□□□ -2.08
CASP4P49662 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
CASP4P49662 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AL355297.2-201ENST00000604792 129 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.05□□□□□ -2.08
CASP4P49662 AL161423.1-201ENST00000613700 262 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AP001486.3-201ENST00000615334 372 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AC027807.2-201ENST00000616099 408 ntBASIC2.05□□□□□ -2.08
CASP4P49662 AL162373.1-201ENST00000620433 407 ntBASIC2.05□□□□□ -2.08
CASP4P49662 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.05□□□□□ -2.08
CASP4P49662 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
CASP4P49662 RNU1-148P-201ENST00000384472 162 ntBASIC2.04□□□□□ -2.08
CASP4P49662 RNA5SP270-201ENST00000411361 118 ntBASIC2.04□□□□□ -2.08
CASP4P49662 AC127391.1-201ENST00000411737 98 ntBASIC2.04□□□□□ -2.08
CASP4P49662 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.04□□□□□ -2.08
CASP4P49662 ELOCP4-201ENST00000420090 333 ntBASIC2.04□□□□□ -2.08
CASP4P49662 ZNF355P-201ENST00000427301 3216 ntBASIC2.04□□□□□ -2.08
CASP4P49662 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.04□□□□□ -2.08
CASP4P49662 USP9YP15-201ENST00000442391 422 ntBASIC2.04□□□□□ -2.08
CASP4P49662 EPS15P1-201ENST00000448836 336 ntBASIC2.04□□□□□ -2.08
CASP4P49662 AC012308.1-201ENST00000451232 178 ntBASIC2.04□□□□□ -2.08
CASP4P49662 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.04□□□□□ -2.08
CASP4P49662 AL583843.1-201ENST00000456070 346 ntBASIC2.04□□□□□ -2.08
CASP4P49662 RPS29P11-201ENST00000496507 171 ntBASIC2.04□□□□□ -2.08
CASP4P49662 SNORA25.11-201ENST00000515935 105 ntBASIC2.04□□□□□ -2.08
CASP4P49662 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
CASP4P49662 AC118273.2-201ENST00000532092 465 ntBASIC2.04□□□□□ -2.08
CASP4P49662 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.04□□□□□ -2.08
CASP4P49662 ADI1P3-201ENST00000549509 470 ntBASIC2.04□□□□□ -2.08
CASP4P49662 ZNF321P-202ENST00000550843 495 ntBASIC2.04□□□□□ -2.08
CASP4P49662 PSMA3P-201ENST00000555485 635 ntBASIC2.04□□□□□ -2.08
CASP4P49662 AC009233.1-201ENST00000616477 371 ntBASIC2.04□□□□□ -2.08
CASP4P49662 DUXAP9-208ENST00000622815 614 ntBASIC2.04□□□□□ -2.08
CASP4P49662 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CASP4P49662 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CASP4P49662 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.08
CASP4P49662 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CASP4P49662 AC092881.1-201ENST00000638218 2733 ntBASIC2.03□□□□□ -2.08
CASP4P49662 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CASP4P49662 CENPCP1-201ENST00000533085 2578 ntBASIC2.03□□□□□ -2.08
CASP4P49662 RNU6-858P-201ENST00000362436 107 ntBASIC2.03□□□□□ -2.08
CASP4P49662 Y_RNA.623-201ENST00000411128 95 ntBASIC2.03□□□□□ -2.08
CASP4P49662 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.03□□□□□ -2.08
CASP4P49662 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.03□□□□□ -2.08
CASP4P49662 AL365338.1-201ENST00000422282 858 ntBASIC2.03□□□□□ -2.08
CASP4P49662 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.03□□□□□ -2.08
CASP4P49662 AL627311.1-201ENST00000431514 115 ntBASIC2.03□□□□□ -2.08
CASP4P49662 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.03□□□□□ -2.08
CASP4P49662 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.03□□□□□ -2.08
CASP4P49662 NDUFB1P2-201ENST00000449477 176 ntBASIC2.03□□□□□ -2.08
CASP4P49662 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.03□□□□□ -2.08
CASP4P49662 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.03□□□□□ -2.08
CASP4P49662 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.03□□□□□ -2.08
CASP4P49662 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.03□□□□□ -2.08
CASP4P49662 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.03□□□□□ -2.08
CASP4P49662 OR5B19P-201ENST00000531766 928 ntBASIC2.03□□□□□ -2.08
CASP4P49662 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.03□□□□□ -2.08
CASP4P49662 AC008015.1-201ENST00000555505 465 ntBASIC2.03□□□□□ -2.08
CASP4P49662 AL022161.1-201ENST00000604390 213 ntBASIC2.03□□□□□ -2.08
CASP4P49662 AC018638.7-201ENST00000605836 1114 ntBASIC2.03□□□□□ -2.08
CASP4P49662 AC092354.1-201ENST00000606057 376 ntBASIC2.03□□□□□ -2.08
CASP4P49662 AL139286.2-201ENST00000606838 396 ntBASIC2.03□□□□□ -2.08
CASP4P49662 AL451064.1-201ENST00000607718 471 ntBASIC2.03□□□□□ -2.08
CASP4P49662 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.03□□□□□ -2.08
CASP4P49662 SDR42E1P4-201ENST00000620894 481 ntBASIC2.03□□□□□ -2.08
CASP4P49662 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.03□□□□□ -2.08
CASP4P49662 AC079248.2-201ENST00000623779 326 ntBASIC2.03□□□□□ -2.08
CASP4P49662 MIR3529-201ENST00000637713 78 ntBASIC2.03□□□□□ -2.08
CASP4P49662 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.03□□□□□ -2.08
CASP4P49662 AC099654.13-201ENST00000639774 207 ntBASIC2.03□□□□□ -2.08
CASP4P49662 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.03□□□□□ -2.08
CASP4P49662 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CASP4P49662 SNORD114-19-201ENST00000363072 75 ntBASIC2.02□□□□□ -2.09
CASP4P49662 SNORA16B-201ENST00000364674 135 ntBASIC2.02□□□□□ -2.09
CASP4P49662 CIR1P3-201ENST00000405137 479 ntBASIC2.02□□□□□ -2.09
CASP4P49662 SUMO2P12-201ENST00000405924 140 ntBASIC2.02□□□□□ -2.09
CASP4P49662 FTH1P15-201ENST00000406984 280 ntBASIC2.02□□□□□ -2.09
CASP4P49662 MIR1261-201ENST00000408659 82 ntBASIC2.02□□□□□ -2.09
CASP4P49662 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
CASP4P49662 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms