Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
PRIM1P49642 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRIM1P49642 RNU6-1272P-201ENST00000362776 107 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 RNU6-275P-201ENST00000364910 107 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 SNORA62.3-201ENST00000365110 153 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 SNORA70.4-201ENST00000365509 134 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PRIM1P49642 RNU6-1310P-201ENST00000384153 107 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 MIR554-201ENST00000384874 96 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 MIR513C-201ENST00000401352 84 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 RNU2-2P-201ENST00000410396 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 AC007919.1-201ENST00000429380 217 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 CR769767.1-201ENST00000436337 346 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.79□□□□□ -1.48
PRIM1P49642 AL358232.1-201ENST00000448030 501 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 AC108751.2-201ENST00000469993 231 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
PRIM1P49642 BTF3L4P4-201ENST00000506381 449 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 RNU7-121P-201ENST00000516604 62 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 RNA5SP108-201ENST00000605921 117 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 RNU2-4P-201ENST00000606190 192 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.15-201ENST00000611544 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.16-201ENST00000613119 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.12-201ENST00000613778 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.9-201ENST00000615427 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.11-201ENST00000616345 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.2-201ENST00000616535 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.3-201ENST00000617785 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.19-201ENST00000618602 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 RNU2-1-201ENST00000618664 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.6-201ENST00000619225 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.5-201ENST00000619465 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 U2.10-201ENST00000620268 191 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.79□□□□□ -1.48
PRIM1P49642 U6.99-201ENST00000637524 83 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.79□□□□□ -1.48
PRIM1P49642 MUC2-202ENST00000613187 4845 ntBASIC5.79□□□□□ -1.48
PRIM1P49642 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PRIM1P49642 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.78□□□□□ -1.48
PRIM1P49642 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRIM1P49642 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PRIM1P49642 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRIM1P49642 AC015813.6-201ENST00000624409 5808 ntBASIC5.78□□□□□ -1.48
PRIM1P49642 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRIM1P49642 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRIM1P49642 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRIM1P49642 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRIM1P49642 RNA5SP31-201ENST00000411144 127 ntBASIC5.78□□□□□ -1.48
PRIM1P49642 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.78□□□□□ -1.48
PRIM1P49642 CKS1BP6-201ENST00000424932 240 ntBASIC5.78□□□□□ -1.48
PRIM1P49642 AL512844.2-201ENST00000433990 593 ntBASIC5.78□□□□□ -1.48
PRIM1P49642 AC012671.1-201ENST00000451912 203 ntBASIC5.78□□□□□ -1.48
PRIM1P49642 RN7SL691P-201ENST00000494487 301 ntBASIC5.78□□□□□ -1.48
PRIM1P49642 RNU6-1333P-201ENST00000516162 93 ntBASIC5.78□□□□□ -1.48
PRIM1P49642 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.78□□□□□ -1.48
PRIM1P49642 AC140479.6-201ENST00000633535 357 ntBASIC5.78□□□□□ -1.48
PRIM1P49642 AP001273.1-201ENST00000624493 3152 ntBASIC5.78□□□□□ -1.48
PRIM1P49642 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PRIM1P49642 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRIM1P49642 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRIM1P49642 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PRIM1P49642 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PRIM1P49642 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.77□□□□□ -1.49
PRIM1P49642 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.77□□□□□ -1.49
PRIM1P49642 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.77□□□□□ -1.49
PRIM1P49642 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRIM1P49642 MIR3065-201ENST00000390137 79 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 AL592291.1-201ENST00000403830 352 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 AC243964.1-201ENST00000441814 261 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 RPS20P10-201ENST00000451209 253 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 RPL23AP3-201ENST00000453844 468 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRIM1P49642 RNA5SP49-201ENST00000516450 115 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.77□□□□□ -1.49
PRIM1P49642 TVP23BP1-201ENST00000557500 617 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.77□□□□□ -1.49
PRIM1P49642 MIR5571-201ENST00000577998 113 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 AC053481.4-201ENST00000583164 216 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 AC079587.1-201ENST00000603846 277 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 AC048347.1-201ENST00000624621 427 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
PRIM1P49642 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRIM1P49642 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.77□□□□□ -1.49
PRIM1P49642 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PRIM1P49642 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRIM1P49642 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRIM1P49642 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRIM1P49642 AC118273.1-201ENST00000525324 3006 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 AL356489.2-201ENST00000566968 3528 ntBASIC5.77□□□□□ -1.49
PRIM1P49642 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRIM1P49642 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.76□□□□□ -1.49
PRIM1P49642 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.76□□□□□ -1.49
PRIM1P49642 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRIM1P49642 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRIM1P49642 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PRIM1P49642 RNU4-80P-201ENST00000363200 141 ntBASIC5.76□□□□□ -1.49
PRIM1P49642 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRIM1P49642 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRIM1P49642 CYCSP19-201ENST00000411715 316 ntBASIC5.76□□□□□ -1.49
PRIM1P49642 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms