Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL359511.1-201ENST00000402970 211 ntBASIC2.64□□□□□ -1.99
LHX1P48742 RPL19P1-201ENST00000411635 428 ntBASIC2.64□□□□□ -1.99
LHX1P48742 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.64□□□□□ -1.99
LHX1P48742 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LHX1P48742 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.64□□□□□ -1.99
LHX1P48742 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX1P48742 PSPHP1-201ENST00000450062 261 ntBASIC2.64□□□□□ -1.99
LHX1P48742 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LHX1P48742 TPTE2P5-203ENST00000458118 728 ntBASIC2.64□□□□□ -1.99
LHX1P48742 SRRM1P2-201ENST00000464531 1192 ntBASIC2.64□□□□□ -1.99
LHX1P48742 RPL9P33-201ENST00000484311 566 ntBASIC2.64□□□□□ -1.99
LHX1P48742 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.64□□□□□ -1.99
LHX1P48742 AC010486.1-201ENST00000511793 424 ntBASIC2.64□□□□□ -1.99
LHX1P48742 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.64□□□□□ -1.99
LHX1P48742 AC104136.1-201ENST00000512969 394 ntBASIC2.64□□□□□ -1.99
LHX1P48742 AP005435.4-201ENST00000529514 284 ntBASIC2.64□□□□□ -1.99
LHX1P48742 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.64□□□□□ -1.99
LHX1P48742 AC027176.1-201ENST00000560204 514 ntBASIC2.64□□□□□ -1.99
LHX1P48742 AC092325.1-201ENST00000566449 554 ntBASIC2.64□□□□□ -1.99
LHX1P48742 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX1P48742 AL391813.1-201ENST00000603098 260 ntBASIC2.64□□□□□ -1.99
LHX1P48742 AC091152.3-201ENST00000604227 325 ntBASIC2.64□□□□□ -1.99
LHX1P48742 AC087045.1-201ENST00000605856 382 ntBASIC2.64□□□□□ -1.99
LHX1P48742 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.64□□□□□ -1.99
LHX1P48742 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX1P48742 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX1P48742 AC099654.12-201ENST00000639868 649 ntBASIC2.64□□□□□ -1.99
LHX1P48742 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX1P48742 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LHX1P48742 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
LHX1P48742 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.63□□□□□ -1.99
LHX1P48742 MTND4P14-201ENST00000435799 1354 ntBASIC2.63□□□□□ -1.99
LHX1P48742 RNU6-552P-201ENST00000362869 119 ntBASIC2.63□□□□□ -1.99
LHX1P48742 RNU6-715P-201ENST00000365204 103 ntBASIC2.63□□□□□ -1.99
LHX1P48742 RNU6-45P-201ENST00000384471 107 ntBASIC2.63□□□□□ -1.99
LHX1P48742 RNU6-19P-201ENST00000384718 107 ntBASIC2.63□□□□□ -1.99
LHX1P48742 MIR518D-201ENST00000385014 87 ntBASIC2.63□□□□□ -1.99
LHX1P48742 RNU6-903P-201ENST00000391270 109 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AL445529.1-201ENST00000398713 389 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX1P48742 AL513477.1-202ENST00000417061 214 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AC009963.1-201ENST00000417265 157 ntBASIC2.63□□□□□ -1.99
LHX1P48742 MTCYBP8-201ENST00000422855 651 ntBASIC2.63□□□□□ -1.99
LHX1P48742 PTGES3P4-201ENST00000426243 356 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AL606489.2-201ENST00000433886 234 ntBASIC2.63□□□□□ -1.99
LHX1P48742 RPL7P54-201ENST00000438336 674 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.63□□□□□ -1.99
LHX1P48742 EEF1B2P7-201ENST00000451177 676 ntBASIC2.63□□□□□ -1.99
LHX1P48742 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX1P48742 SNRPFP3-201ENST00000457792 225 ntBASIC2.63□□□□□ -1.99
LHX1P48742 GZMAP1-201ENST00000503054 631 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AC116655.1-201ENST00000508324 901 ntBASIC2.63□□□□□ -1.99
LHX1P48742 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX1P48742 AC109329.2-201ENST00000519658 482 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.63□□□□□ -1.99
LHX1P48742 ELOCP31-201ENST00000540463 467 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX1P48742 AC073539.2-201ENST00000597113 165 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX1P48742 RPL23AP88-201ENST00000605759 454 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AP001330.5-201ENST00000607176 411 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AP001596.2-201ENST00000608410 312 ntBASIC2.63□□□□□ -1.99
LHX1P48742 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.63□□□□□ -1.99
LHX1P48742 AC068792.1-201ENST00000621354 417 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AL359880.1-201ENST00000621879 266 ntBASIC2.63□□□□□ -1.99
LHX1P48742 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX1P48742 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
LHX1P48742 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
LHX1P48742 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LHX1P48742 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
LHX1P48742 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
LHX1P48742 AC004520.1-201ENST00000608362 1413 ntBASIC2.62□□□□□ -1.99
LHX1P48742 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LHX1P48742 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LHX1P48742 AL139276.1-201ENST00000311910 1001 ntBASIC2.62□□□□□ -1.99
LHX1P48742 RNU6-1085P-201ENST00000363576 107 ntBASIC2.62□□□□□ -1.99
LHX1P48742 RNU6-1322P-201ENST00000364309 107 ntBASIC2.62□□□□□ -1.99
LHX1P48742 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LHX1P48742 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.62□□□□□ -1.99
LHX1P48742 Y_RNA.481-201ENST00000384373 102 ntBASIC2.62□□□□□ -1.99
LHX1P48742 MIR147B-201ENST00000390185 80 ntBASIC2.62□□□□□ -1.99
LHX1P48742 AC016831.2-201ENST00000417179 352 ntBASIC2.62□□□□□ -1.99
LHX1P48742 AL353621.1-201ENST00000418219 243 ntBASIC2.62□□□□□ -1.99
LHX1P48742 TOMM20P4-201ENST00000427861 435 ntBASIC2.62□□□□□ -1.99
LHX1P48742 TIMM9P3-201ENST00000428659 274 ntBASIC2.62□□□□□ -1.99
LHX1P48742 FDX1P2-201ENST00000450769 375 ntBASIC2.62□□□□□ -1.99
LHX1P48742 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.62□□□□□ -1.99
LHX1P48742 AL163973.1-201ENST00000484753 577 ntBASIC2.62□□□□□ -1.99
LHX1P48742 MTND3P25-201ENST00000509243 135 ntBASIC2.62□□□□□ -1.99
LHX1P48742 SCARNA17.1-201ENST00000516211 143 ntBASIC2.62□□□□□ -1.99
LHX1P48742 SCARNA17.2-201ENST00000516334 143 ntBASIC2.62□□□□□ -1.99
LHX1P48742 RNU6-720P-201ENST00000516363 108 ntBASIC2.62□□□□□ -1.99
LHX1P48742 AC104383.1-201ENST00000530297 370 ntBASIC2.62□□□□□ -1.99
LHX1P48742 AC022880.1-201ENST00000534017 973 ntBASIC2.62□□□□□ -1.99
LHX1P48742 AP002770.2-201ENST00000543613 532 ntBASIC2.62□□□□□ -1.99
LHX1P48742 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.62□□□□□ -1.99
LHX1P48742 AC025678.1-201ENST00000567861 338 ntBASIC2.62□□□□□ -1.99
LHX1P48742 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.62□□□□□ -1.99
LHX1P48742 AC012557.2-201ENST00000605919 418 ntBASIC2.62□□□□□ -1.99
LHX1P48742 SCARNA17.4-201ENST00000614296 143 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms