Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.91□□□□□ -1.94
RXRGP48443 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RXRGP48443 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.91□□□□□ -1.94
RXRGP48443 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.91□□□□□ -1.94
RXRGP48443 MIR3941-201ENST00000582572 103 ntBASIC2.91□□□□□ -1.94
RXRGP48443 AC093788.1-201ENST00000609356 927 ntBASIC2.91□□□□□ -1.94
RXRGP48443 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.91□□□□□ -1.94
RXRGP48443 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RXRGP48443 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
RXRGP48443 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RXRGP48443 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
RXRGP48443 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.91□□□□□ -1.94
RXRGP48443 RBBP8P1-201ENST00000449447 1844 ntBASIC2.91□□□□□ -1.94
RXRGP48443 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RXRGP48443 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.9□□□□□ -1.94
RXRGP48443 Y_RNA.1-201ENST00000352915 104 ntBASIC2.9□□□□□ -1.95
RXRGP48443 MIR449A-201ENST00000362113 91 ntBASIC2.9□□□□□ -1.95
RXRGP48443 RNU6-1103P-201ENST00000384150 107 ntBASIC2.9□□□□□ -1.95
RXRGP48443 RNU6-1119P-201ENST00000384349 108 ntBASIC2.9□□□□□ -1.95
RXRGP48443 RNU6-517P-201ENST00000384362 110 ntBASIC2.9□□□□□ -1.95
RXRGP48443 Y_RNA.480-201ENST00000384364 102 ntBASIC2.9□□□□□ -1.95
RXRGP48443 RNU6-607P-201ENST00000411283 108 ntBASIC2.9□□□□□ -1.95
RXRGP48443 OR9R1P-201ENST00000412200 877 ntBASIC2.9□□□□□ -1.95
RXRGP48443 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
RXRGP48443 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.9□□□□□ -1.95
RXRGP48443 RPL23AP49-201ENST00000492925 468 ntBASIC2.9□□□□□ -1.95
RXRGP48443 AC093534.1-201ENST00000504977 132 ntBASIC2.9□□□□□ -1.95
RXRGP48443 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
RXRGP48443 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
RXRGP48443 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.9□□□□□ -1.95
RXRGP48443 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RXRGP48443 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.9□□□□□ -1.95
RXRGP48443 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
RXRGP48443 LRRC37A5P-203ENST00000580181 585 ntBASIC2.9□□□□□ -1.95
RXRGP48443 AC073410.2-201ENST00000603240 332 ntBASIC2.9□□□□□ -1.95
RXRGP48443 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
RXRGP48443 AC010378.1-201ENST00000619270 362 ntBASIC2.9□□□□□ -1.95
RXRGP48443 AL031601.2-202ENST00000622650 282 ntBASIC2.9□□□□□ -1.95
RXRGP48443 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.9□□□□□ -1.95
RXRGP48443 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RXRGP48443 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RXRGP48443 Z82195.2-201ENST00000612348 18351 ntBASIC2.89□□□□□ -1.95
RXRGP48443 Y_RNA.51-201ENST00000362725 102 ntBASIC2.89□□□□□ -1.95
RXRGP48443 RNU6-384P-201ENST00000364900 104 ntBASIC2.89□□□□□ -1.95
RXRGP48443 RNU6-301P-201ENST00000384277 107 ntBASIC2.89□□□□□ -1.95
RXRGP48443 DEFB108C-201ENST00000400154 252 ntBASIC2.89□□□□□ -1.95
RXRGP48443 HMGN2P35-201ENST00000412164 270 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.89□□□□□ -1.95
RXRGP48443 CYCSP48-201ENST00000417124 323 ntBASIC2.89□□□□□ -1.95
RXRGP48443 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.89□□□□□ -1.95
RXRGP48443 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.89□□□□□ -1.95
RXRGP48443 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.89□□□□□ -1.95
RXRGP48443 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.89□□□□□ -1.95
RXRGP48443 AC073901.1-201ENST00000462471 408 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC117503.1-201ENST00000472241 394 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.89□□□□□ -1.95
RXRGP48443 RNU1-86P-201ENST00000516108 154 ntBASIC2.89□□□□□ -1.95
RXRGP48443 RNU1-107P-201ENST00000516617 154 ntBASIC2.89□□□□□ -1.95
RXRGP48443 SNORA43.2-201ENST00000516652 128 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.89□□□□□ -1.95
RXRGP48443 MTCO3P13-201ENST00000577757 781 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC023043.3-201ENST00000593113 385 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC073539.2-201ENST00000597113 165 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.89□□□□□ -1.95
RXRGP48443 AC091805.2-201ENST00000603848 235 ntBASIC2.89□□□□□ -1.95
RXRGP48443 HMGB1P24-202ENST00000615653 685 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC008121.3-201ENST00000618726 433 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC009509.4-201ENST00000619202 509 ntBASIC2.89□□□□□ -1.95
RXRGP48443 AC024581.2-201ENST00000619986 252 ntBASIC2.89□□□□□ -1.95
RXRGP48443 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RXRGP48443 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
RXRGP48443 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
RXRGP48443 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.88□□□□□ -1.95
RXRGP48443 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RXRGP48443 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.88□□□□□ -1.95
RXRGP48443 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.88□□□□□ -1.95
RXRGP48443 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
RXRGP48443 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RXRGP48443 RNU6-942P-201ENST00000363002 107 ntBASIC2.88□□□□□ -1.95
RXRGP48443 RNU6-1072P-201ENST00000384703 107 ntBASIC2.88□□□□□ -1.95
RXRGP48443 RNU6-443P-201ENST00000384780 107 ntBASIC2.88□□□□□ -1.95
RXRGP48443 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.88□□□□□ -1.95
RXRGP48443 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
RXRGP48443 RNU4-55P-201ENST00000410731 137 ntBASIC2.88□□□□□ -1.95
RXRGP48443 RNU6-1245P-201ENST00000411130 106 ntBASIC2.88□□□□□ -1.95
RXRGP48443 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.88□□□□□ -1.95
RXRGP48443 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.88□□□□□ -1.95
RXRGP48443 NUP35P1-201ENST00000422734 947 ntBASIC2.88□□□□□ -1.95
RXRGP48443 AL591043.1-201ENST00000432461 424 ntBASIC2.88□□□□□ -1.95
RXRGP48443 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.88□□□□□ -1.95
RXRGP48443 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.88□□□□□ -1.95
RXRGP48443 AC124916.1-201ENST00000444020 547 ntBASIC2.88□□□□□ -1.95
RXRGP48443 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.88□□□□□ -1.95
RXRGP48443 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.88□□□□□ -1.95
RXRGP48443 RPL23AP11-201ENST00000475260 469 ntBASIC2.88□□□□□ -1.95
RXRGP48443 RPL9P33-201ENST00000484311 566 ntBASIC2.88□□□□□ -1.95
RXRGP48443 RN7SL20P-201ENST00000488827 297 ntBASIC2.88□□□□□ -1.95
RXRGP48443 AC140059.1-201ENST00000489238 361 ntBASIC2.88□□□□□ -1.95
RXRGP48443 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.88□□□□□ -1.95
RXRGP48443 RNU6-405P-201ENST00000516637 110 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms