Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC011155.2-201ENST00000623202 216 ntBASIC2.57□□□□□ -2
NEDD4P46934 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NEDD4P46934 AC099654.12-201ENST00000639868 649 ntBASIC2.57□□□□□ -2
NEDD4P46934 AP006437.1-201ENST00000641440 3685 ntBASIC2.56□□□□□ -2
NEDD4P46934 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
NEDD4P46934 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.56□□□□□ -2
NEDD4P46934 NACAP2-201ENST00000318548 624 ntBASIC2.56□□□□□ -2
NEDD4P46934 Y_RNA.33-201ENST00000362591 102 ntBASIC2.56□□□□□ -2
NEDD4P46934 RNU6-395P-201ENST00000365662 106 ntBASIC2.56□□□□□ -2
NEDD4P46934 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.56□□□□□ -2
NEDD4P46934 MTCO3P40-201ENST00000392516 676 ntBASIC2.56□□□□□ -2
NEDD4P46934 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.56□□□□□ -2
NEDD4P46934 AL160275.3-201ENST00000423876 471 ntBASIC2.56□□□□□ -2
NEDD4P46934 AL365496.1-201ENST00000426885 215 ntBASIC2.56□□□□□ -2
NEDD4P46934 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.56□□□□□ -2
NEDD4P46934 RPS15AP9-201ENST00000439856 381 ntBASIC2.56□□□□□ -2
NEDD4P46934 MTND1P18-201ENST00000448191 573 ntBASIC2.56□□□□□ -2
NEDD4P46934 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.56□□□□□ -2
NEDD4P46934 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.56□□□□□ -2
NEDD4P46934 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.56□□□□□ -2
NEDD4P46934 RBBP4P6-201ENST00000508098 202 ntBASIC2.56□□□□□ -2
NEDD4P46934 RNA5SP200-201ENST00000516360 103 ntBASIC2.56□□□□□ -2
NEDD4P46934 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
NEDD4P46934 RNA5SP503-201ENST00000517047 117 ntBASIC2.56□□□□□ -2
NEDD4P46934 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.56□□□□□ -2
NEDD4P46934 SNRPGP18-201ENST00000553000 214 ntBASIC2.56□□□□□ -2
NEDD4P46934 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
NEDD4P46934 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.56□□□□□ -2
NEDD4P46934 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.56□□□□□ -2
NEDD4P46934 MIR6863-201ENST00000636112 90 ntBASIC2.56□□□□□ -2
NEDD4P46934 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.56□□□□□ -2
NEDD4P46934 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.56□□□□□ -2
NEDD4P46934 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.56□□□□□ -2
NEDD4P46934 MTND4P35-201ENST00000604257 1375 ntBASIC2.55□□□□□ -2
NEDD4P46934 RNU6-1287P-201ENST00000362914 107 ntBASIC2.55□□□□□ -2
NEDD4P46934 RNU1-105P-201ENST00000363470 161 ntBASIC2.55□□□□□ -2
NEDD4P46934 RNA5SP139-201ENST00000364340 117 ntBASIC2.55□□□□□ -2
NEDD4P46934 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.55□□□□□ -2
NEDD4P46934 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
NEDD4P46934 RNU6-1060P-201ENST00000384664 107 ntBASIC2.55□□□□□ -2
NEDD4P46934 SNORA64-201ENST00000384674 134 ntBASIC2.55□□□□□ -2
NEDD4P46934 CISD1P1-201ENST00000393907 327 ntBASIC2.55□□□□□ -2
NEDD4P46934 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.55□□□□□ -2
NEDD4P46934 RNU2-9P-201ENST00000410194 145 ntBASIC2.55□□□□□ -2
NEDD4P46934 OR6C66P-201ENST00000414917 930 ntBASIC2.55□□□□□ -2
NEDD4P46934 MTND1P23-201ENST00000416931 372 ntBASIC2.55□□□□□ -2
NEDD4P46934 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.55□□□□□ -2
NEDD4P46934 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.55□□□□□ -2
NEDD4P46934 AL596276.1-201ENST00000434465 418 ntBASIC2.55□□□□□ -2
NEDD4P46934 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.55□□□□□ -2
NEDD4P46934 AC096638.1-201ENST00000444678 216 ntBASIC2.55□□□□□ -2
NEDD4P46934 AL118520.1-201ENST00000450770 291 ntBASIC2.55□□□□□ -2
NEDD4P46934 SRRM1P2-201ENST00000464531 1192 ntBASIC2.55□□□□□ -2
NEDD4P46934 AC006512.1-201ENST00000468816 291 ntBASIC2.55□□□□□ -2
NEDD4P46934 TRBV1-201ENST00000476502 284 ntBASIC2.55□□□□□ -2
NEDD4P46934 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.55□□□□□ -2
NEDD4P46934 SUMO2P6-201ENST00000505273 288 ntBASIC2.55□□□□□ -2
NEDD4P46934 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.55□□□□□ -2
NEDD4P46934 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.55□□□□□ -2
NEDD4P46934 AP001893.2-201ENST00000526949 202 ntBASIC2.55□□□□□ -2
NEDD4P46934 AC022880.1-201ENST00000534017 973 ntBASIC2.55□□□□□ -2
NEDD4P46934 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.55□□□□□ -2
NEDD4P46934 AL157871.3-201ENST00000557231 293 ntBASIC2.55□□□□□ -2
NEDD4P46934 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.55□□□□□ -2
NEDD4P46934 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.55□□□□□ -2
NEDD4P46934 LRRC37A5P-203ENST00000580181 585 ntBASIC2.55□□□□□ -2
NEDD4P46934 AL138889.2-201ENST00000603883 242 ntBASIC2.55□□□□□ -2
NEDD4P46934 AL670379.4-201ENST00000605279 254 ntBASIC2.55□□□□□ -2
NEDD4P46934 AC012557.2-201ENST00000605919 418 ntBASIC2.55□□□□□ -2
NEDD4P46934 MIR6873-201ENST00000622788 63 ntBASIC2.55□□□□□ -2
NEDD4P46934 AC024940.5-201ENST00000622889 474 ntBASIC2.55□□□□□ -2
NEDD4P46934 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.55□□□□□ -2
NEDD4P46934 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.55□□□□□ -2
NEDD4P46934 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.55□□□□□ -2
NEDD4P46934 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.55□□□□□ -2
NEDD4P46934 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
NEDD4P46934 Y_RNA.41-201ENST00000362646 102 ntBASIC2.54□□□□□ -2
NEDD4P46934 CD24P4-201ENST00000382840 243 ntBASIC2.54□□□□□ -2
NEDD4P46934 RNU1-109P-201ENST00000383960 147 ntBASIC2.54□□□□□ -2
NEDD4P46934 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.54□□□□□ -2
NEDD4P46934 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.54□□□□□ -2
NEDD4P46934 RNA5SP425-201ENST00000410336 112 ntBASIC2.54□□□□□ -2
NEDD4P46934 RNU2-29P-201ENST00000410423 189 ntBASIC2.54□□□□□ -2
NEDD4P46934 RNA5SP111-201ENST00000411386 101 ntBASIC2.54□□□□□ -2
NEDD4P46934 USP9YP6-201ENST00000413550 854 ntBASIC2.54□□□□□ -2
NEDD4P46934 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.54□□□□□ -2
NEDD4P46934 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.54□□□□□ -2
NEDD4P46934 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.54□□□□□ -2
NEDD4P46934 SKA2P1-201ENST00000425592 390 ntBASIC2.54□□□□□ -2
NEDD4P46934 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.54□□□□□ -2
NEDD4P46934 AC098831.1-201ENST00000440661 216 ntBASIC2.54□□□□□ -2
NEDD4P46934 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.54□□□□□ -2
NEDD4P46934 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.54□□□□□ -2
NEDD4P46934 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.54□□□□□ -2
NEDD4P46934 AC139453.3-201ENST00000493276 369 ntBASIC2.54□□□□□ -2
NEDD4P46934 EIF4EP3-201ENST00000498782 656 ntBASIC2.54□□□□□ -2
NEDD4P46934 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.54□□□□□ -2
NEDD4P46934 RNU6-506P-201ENST00000516553 94 ntBASIC2.54□□□□□ -2
NEDD4P46934 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.54□□□□□ -2
NEDD4P46934 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms