Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC010587.2-201ENST00000511727 448 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 MRPS33P3-201ENST00000513456 322 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 RNU6-201P-201ENST00000517100 61 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 RNU2-19P-201ENST00000517288 84 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
BRCA1P38398 AL157871.3-201ENST00000557231 293 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC012435.1-202ENST00000568772 240 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 MIR3146-201ENST00000580367 79 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AL358072.1-201ENST00000604156 575 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC121334.2-201ENST00000605387 271 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AL136313.1-201ENST00000624804 202 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
BRCA1P38398 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
BRCA1P38398 AL354685.2-201ENST00000448218 1447 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 SNORA3A-201ENST00000364113 130 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 SMIM11P1-201ENST00000369586 178 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AL359634.1-202ENST00000404721 284 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 FTH1P15-201ENST00000406984 280 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 MIR1284-201ENST00000408337 120 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 RNU2-49P-201ENST00000410666 184 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.75□□□□□ -2.13
BRCA1P38398 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.75□□□□□ -2.13
BRCA1P38398 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.75□□□□□ -2.13
BRCA1P38398 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.75□□□□□ -2.13
BRCA1P38398 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 CECR9-201ENST00000453421 199 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
BRCA1P38398 AC098591.2-201ENST00000510152 315 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.75□□□□□ -2.13
BRCA1P38398 RNU6-1003P-201ENST00000517099 105 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC016957.1-201ENST00000534895 309 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.75□□□□□ -2.13
BRCA1P38398 AC025165.5-201ENST00000602802 578 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC021171.1-201ENST00000603137 706 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AL596327.1-201ENST00000603629 213 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.75□□□□□ -2.13
BRCA1P38398 AP001486.3-201ENST00000615334 372 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AC008121.3-201ENST00000618726 433 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 AP003400.5-201ENST00000624827 617 ntBASIC1.75□□□□□ -2.13
BRCA1P38398 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.75□□□□□ -2.13
BRCA1P38398 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
BRCA1P38398 CDC27P3-201ENST00000635418 1910 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 RNU6-1200P-201ENST00000384162 107 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 RNU1-52P-201ENST00000384190 164 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 MIR548J-201ENST00000408833 112 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.74□□□□□ -2.13
BRCA1P38398 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.74□□□□□ -2.13
BRCA1P38398 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.74□□□□□ -2.13
BRCA1P38398 MTCYBP18-201ENST00000501056 747 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 HMGB3P3-201ENST00000510526 400 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 MIR892C-201ENST00000516410 77 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 RNU5A-4P-201ENST00000516588 111 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 AC105185.1-201ENST00000518705 535 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.74□□□□□ -2.13
BRCA1P38398 AC087045.1-201ENST00000605856 382 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 U4atac.1-201ENST00000618345 95 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 AP000484.1-201ENST00000620067 1252 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 DUXAP9-208ENST00000622815 614 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.74□□□□□ -2.13
BRCA1P38398 AC121333.1-201ENST00000567488 2709 ntBASIC1.74□□□□□ -2.13
BRCA1P38398 AC138393.1-203ENST00000327086 343 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.73□□□□□ -2.13
BRCA1P38398 SRIP3-201ENST00000413200 219 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 ELOCP17-201ENST00000414751 326 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 VPS26BP1-201ENST00000417155 755 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 ELOCP9-201ENST00000418624 239 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AL160275.3-201ENST00000423876 471 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.73□□□□□ -2.13
BRCA1P38398 AL627311.1-201ENST00000431514 115 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 UBE2FP3-201ENST00000436366 524 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 FABP5P15-201ENST00000453566 214 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.73□□□□□ -2.13
BRCA1P38398 LINC00933-203ENST00000559812 219 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 MIR3126-201ENST00000577443 74 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 MTND3P19-201ENST00000603825 345 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AC025588.2-201ENST00000604851 466 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
BRCA1P38398 AL355816.2-201ENST00000610049 647 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 MIR6840-201ENST00000611937 71 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AC021755.4-201ENST00000616620 456 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.73□□□□□ -2.13
BRCA1P38398 AC092125.1-201ENST00000562568 1995 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.73□□□□□ -2.13
BRCA1P38398 AC073343.1-201ENST00000328239 651 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 SNORD114-19-201ENST00000363072 75 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 SNORA4.1-201ENST00000364263 144 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 RNU6-658P-201ENST00000384606 106 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AL353706.1-201ENST00000436728 494 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 IFNA20P-201ENST00000436840 528 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AL121769.1-201ENST00000469473 401 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 MTND1P3-201ENST00000484956 952 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AC023194.1-201ENST00000493084 308 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.73□□□□□ -2.13
BRCA1P38398 RNU6-64P-201ENST00000517119 105 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AC107934.1-201ENST00000522215 217 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 MTCO2P15-201ENST00000532655 656 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.73□□□□□ -2.13
BRCA1P38398 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms