Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.35□□□□□ -2.35
SNCAP37840 FABP5P5-201ENST00000515537 406 ntBASIC0.35□□□□□ -2.35
SNCAP37840 RNU6-678P-201ENST00000516832 109 ntBASIC0.35□□□□□ -2.35
SNCAP37840 RNU6-703P-201ENST00000516946 107 ntBASIC0.35□□□□□ -2.35
SNCAP37840 MTCO2P15-201ENST00000532655 656 ntBASIC0.35□□□□□ -2.35
SNCAP37840 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.35□□□□□ -2.35
SNCAP37840 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.35□□□□□ -2.35
SNCAP37840 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.35□□□□□ -2.35
SNCAP37840 RNU6-91P-201ENST00000607774 107 ntBASIC0.35□□□□□ -2.35
SNCAP37840 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.35□□□□□ -2.35
SNCAP37840 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.35□□□□□ -2.35
SNCAP37840 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.35□□□□□ -2.35
SNCAP37840 RNU6-891P-201ENST00000384280 111 ntBASIC0.34□□□□□ -2.36
SNCAP37840 RPL23AP32-201ENST00000395315 459 ntBASIC0.34□□□□□ -2.36
SNCAP37840 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.34□□□□□ -2.36
SNCAP37840 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.34□□□□□ -2.36
SNCAP37840 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.34□□□□□ -2.36
SNCAP37840 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.34□□□□□ -2.36
SNCAP37840 C8orf59P1-201ENST00000429930 303 ntBASIC0.34□□□□□ -2.36
SNCAP37840 FTH1P12-201ENST00000432137 551 ntBASIC0.34□□□□□ -2.36
SNCAP37840 AL603825.1-201ENST00000438481 80 ntBASIC0.34□□□□□ -2.36
SNCAP37840 RPL32P14-201ENST00000463196 378 ntBASIC0.34□□□□□ -2.36
SNCAP37840 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.34□□□□□ -2.36
SNCAP37840 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.34□□□□□ -2.36
SNCAP37840 IGJP1-201ENST00000522682 475 ntBASIC0.34□□□□□ -2.36
SNCAP37840 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.34□□□□□ -2.36
SNCAP37840 AC008127.2-201ENST00000549925 1075 ntBASIC0.34□□□□□ -2.36
SNCAP37840 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.34□□□□□ -2.36
SNCAP37840 MIR4714-201ENST00000580728 77 ntBASIC0.34□□□□□ -2.36
SNCAP37840 AC002545.1-201ENST00000592511 181 ntBASIC0.34□□□□□ -2.36
SNCAP37840 AC105129.3-201ENST00000605455 485 ntBASIC0.34□□□□□ -2.36
SNCAP37840 AC008993.2-201ENST00000631744 806 ntBASIC0.34□□□□□ -2.36
SNCAP37840 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
SNCAP37840 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.34□□□□□ -2.36
SNCAP37840 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SNCAP37840 RNU6-707P-201ENST00000364647 95 ntBASIC0.33□□□□□ -2.36
SNCAP37840 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SNCAP37840 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.33□□□□□ -2.36
SNCAP37840 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
SNCAP37840 RNU6-360P-201ENST00000390944 104 ntBASIC0.33□□□□□ -2.36
SNCAP37840 RNU2-32P-201ENST00000411193 191 ntBASIC0.33□□□□□ -2.36
SNCAP37840 RPS26P5-201ENST00000418544 335 ntBASIC0.33□□□□□ -2.36
SNCAP37840 AC092634.6-201ENST00000418558 192 ntBASIC0.33□□□□□ -2.36
SNCAP37840 MTND1P28-201ENST00000435623 950 ntBASIC0.33□□□□□ -2.36
SNCAP37840 GTF2IP13-201ENST00000438487 386 ntBASIC0.33□□□□□ -2.36
SNCAP37840 RPS15AP9-201ENST00000439856 381 ntBASIC0.33□□□□□ -2.36
SNCAP37840 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.33□□□□□ -2.36
SNCAP37840 RPL7P43-201ENST00000478876 753 ntBASIC0.33□□□□□ -2.36
SNCAP37840 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.33□□□□□ -2.36
SNCAP37840 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SNCAP37840 PDCD5P2-201ENST00000507570 312 ntBASIC0.33□□□□□ -2.36
SNCAP37840 ATP5EP1-201ENST00000510257 156 ntBASIC0.33□□□□□ -2.36
SNCAP37840 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SNCAP37840 RNU4-54P-201ENST00000516428 129 ntBASIC0.33□□□□□ -2.36
SNCAP37840 RNA5SP121-201ENST00000516537 101 ntBASIC0.33□□□□□ -2.36
SNCAP37840 RNU6-229P-201ENST00000516614 102 ntBASIC0.33□□□□□ -2.36
SNCAP37840 RNA5SP290-201ENST00000517133 127 ntBASIC0.33□□□□□ -2.36
SNCAP37840 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.33□□□□□ -2.36
SNCAP37840 AC022387.2-201ENST00000604050 448 ntBASIC0.33□□□□□ -2.36
SNCAP37840 AL355802.4-201ENST00000607635 548 ntBASIC0.33□□□□□ -2.36
SNCAP37840 AC096772.1-201ENST00000609146 564 ntBASIC0.33□□□□□ -2.36
SNCAP37840 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.33□□□□□ -2.36
SNCAP37840 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.33□□□□□ -2.36
SNCAP37840 AC080188.3-201ENST00000624842 748 ntBASIC0.33□□□□□ -2.36
SNCAP37840 AC095038.3-201ENST00000634439 195 ntBASIC0.33□□□□□ -2.36
SNCAP37840 AC100821.1-201ENST00000523153 2479 ntBASIC0.32□□□□□ -2.36
SNCAP37840 MTCO1P18-201ENST00000455518 1419 ntBASIC0.32□□□□□ -2.36
SNCAP37840 MTND5P11-201ENST00000511037 1812 ntBASIC0.32□□□□□ -2.36
SNCAP37840 SNORD114-24-201ENST00000365029 72 ntBASIC0.32□□□□□ -2.36
SNCAP37840 SNORD114-22-201ENST00000365423 72 ntBASIC0.32□□□□□ -2.36
SNCAP37840 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AL589872.1-201ENST00000426602 288 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AC244023.1-201ENST00000426884 112 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.32□□□□□ -2.36
SNCAP37840 AC092628.1-201ENST00000436250 252 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.32□□□□□ -2.36
SNCAP37840 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.32□□□□□ -2.36
SNCAP37840 AC132479.1-201ENST00000449160 144 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.32□□□□□ -2.36
SNCAP37840 AC013267.1-201ENST00000458227 267 ntBASIC0.32□□□□□ -2.36
SNCAP37840 RPS29P1-201ENST00000465274 159 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AL163195.1-201ENST00000496941 348 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AC084024.2-201ENST00000503480 791 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.32□□□□□ -2.36
SNCAP37840 RNU6-1092P-201ENST00000516955 87 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AP003392.2-201ENST00000527269 208 ntBASIC0.32□□□□□ -2.36
SNCAP37840 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SNCAP37840 MRPS36P5-201ENST00000551909 298 ntBASIC0.32□□□□□ -2.36
SNCAP37840 MIR3169-201ENST00000578032 83 ntBASIC0.32□□□□□ -2.36
SNCAP37840 RPL30P11-203ENST00000598995 310 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AC242498.1-201ENST00000604134 111 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AC004853.1-201ENST00000604902 698 ntBASIC0.32□□□□□ -2.36
SNCAP37840 AC243994.1-201ENST00000618627 109 ntBASIC0.32□□□□□ -2.36
SNCAP37840 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.32□□□□□ -2.36
SNCAP37840 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SNCAP37840 AC092447.10-201ENST00000620607 1652 ntBASIC0.31□□□□□ -2.36
SNCAP37840 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.31□□□□□ -2.36
SNCAP37840 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
SNCAP37840 RNU6-546P-201ENST00000383991 107 ntBASIC0.31□□□□□ -2.36
SNCAP37840 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms