Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 MIR548AC-201ENST00000585049 88 ntBASIC3.33□□□□□ -1.88
HOXD12P35452 AC020895.1-201ENST00000595362 272 ntBASIC3.33□□□□□ -1.88
HOXD12P35452 uc_338.15-201ENST00000615470 191 ntBASIC3.33□□□□□ -1.88
HOXD12P35452 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXD12P35452 SNORD39.4-201ENST00000620099 78 ntBASIC3.33□□□□□ -1.88
HOXD12P35452 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXD12P35452 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HOXD12P35452 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXD12P35452 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD12P35452 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HOXD12P35452 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HOXD12P35452 AL021368.2-201ENST00000606125 5352 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD12P35452 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HOXD12P35452 MIR450B-201ENST00000401182 78 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD12P35452 RPLP0P7-201ENST00000416050 667 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 AC245291.1-201ENST00000419501 328 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXD12P35452 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD12P35452 CECR9-201ENST00000453421 199 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 FABP5P15-201ENST00000453566 214 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 RPL26P9-201ENST00000457466 433 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 RPL7P43-201ENST00000478876 753 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 AC006445.1-201ENST00000491925 405 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXD12P35452 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD12P35452 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXD12P35452 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD12P35452 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD12P35452 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXD12P35452 AC010653.1-201ENST00000571108 881 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXD12P35452 AC073539.2-201ENST00000597113 165 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXD12P35452 AC090617.7-201ENST00000623952 126 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD12P35452 MIR1302-1-201ENST00000637932 143 ntBASIC3.32□□□□□ -1.88
HOXD12P35452 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD12P35452 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD12P35452 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HOXD12P35452 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD12P35452 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXD12P35452 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXD12P35452 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD12P35452 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HOXD12P35452 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD12P35452 AC138915.1-201ENST00000565427 1685 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD12P35452 SNORA80A-201ENST00000363922 136 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 RNA5SP42-201ENST00000364278 115 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 Y_RNA.813-201ENST00000364639 102 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD12P35452 Y_RNA.535-201ENST00000384612 99 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 RPL7P10-201ENST00000417407 739 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AL358075.3-201ENST00000426289 226 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD12P35452 AL360271.2-201ENST00000447710 161 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD12P35452 RPL12P25-201ENST00000455592 494 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 RPS26P21-201ENST00000475397 348 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXD12P35452 TRBVA-201ENST00000498804 316 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD12P35452 MTND3P25-201ENST00000509243 135 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXD12P35452 RNU6-277P-201ENST00000516272 106 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 Y_RNA.682-201ENST00000516457 100 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 Y_RNA.691-201ENST00000516611 103 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 RNU6-256P-201ENST00000516747 97 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 RNU6-1088P-201ENST00000516850 104 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AP000889.2-201ENST00000532684 490 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD12P35452 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD12P35452 AL157871.3-201ENST00000557231 293 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXD12P35452 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD12P35452 AL355375.2-201ENST00000574825 175 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXD12P35452 MIR3672-201ENST00000584290 82 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 UCA1.1-201ENST00000620952 75 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AC002064.3-201ENST00000623448 346 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AC006386.2-201ENST00000624491 75 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 AC012005.1-201ENST00000624575 75 ntBASIC3.31□□□□□ -1.88
HOXD12P35452 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD12P35452 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD12P35452 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD12P35452 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HOXD12P35452 AL359693.1-201ENST00000614959 2407 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXD12P35452 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXD12P35452 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
HOXD12P35452 AC004944.1-201ENST00000517807 3059 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 Y_RNA.58-201ENST00000362807 102 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 Y_RNA.154-201ENST00000363624 102 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 RNU6-1303P-201ENST00000364841 107 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 RNY3P1-201ENST00000365085 102 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 RNY3-201ENST00000365484 102 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms