Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC130454.1-201ENST00000622948 401 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 AC010149.2-201ENST00000637608 315 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
CASQ1P31415 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CASQ1P31415 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CASQ1P31415 AC119751.3-201ENST00000399720 670 ntBASIC1.41□□□□□ -2.18
CASQ1P31415 RPS12P24-201ENST00000412619 387 ntBASIC1.41□□□□□ -2.18
CASQ1P31415 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.41□□□□□ -2.18
CASQ1P31415 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.41□□□□□ -2.18
CASQ1P31415 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.41□□□□□ -2.18
CASQ1P31415 AC007677.1-201ENST00000445757 515 ntBASIC1.41□□□□□ -2.18
CASQ1P31415 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.41□□□□□ -2.18
CASQ1P31415 AP004247.1-201ENST00000531556 1289 ntBASIC1.41□□□□□ -2.18
CASQ1P31415 MIR4435-1-201ENST00000582552 80 ntBASIC1.41□□□□□ -2.18
CASQ1P31415 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.41□□□□□ -2.18
CASQ1P31415 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CASQ1P31415 ZNF72P-201ENST00000425869 1908 ntBASIC1.4□□□□□ -2.18
CASQ1P31415 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CASQ1P31415 MTND5P33-201ENST00000571250 1450 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 SNORD114-1-201ENST00000362705 72 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 U8.2-201ENST00000363156 134 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 RNU6-701P-201ENST00000384059 107 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 RNU6-166P-201ENST00000384371 107 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 RNU6-278P-201ENST00000390945 109 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.4□□□□□ -2.19
CASQ1P31415 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.4□□□□□ -2.19
CASQ1P31415 AL135790.2-201ENST00000437701 267 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 MTND4P15-201ENST00000437913 1033 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 USP9YP17-201ENST00000444617 696 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.4□□□□□ -2.19
CASQ1P31415 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.4□□□□□ -2.19
CASQ1P31415 HMGN1P13-201ENST00000505795 138 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CASQ1P31415 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.4□□□□□ -2.19
CASQ1P31415 RN7SKP179-201ENST00000516126 217 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.4□□□□□ -2.19
CASQ1P31415 MTND1P36-201ENST00000522384 936 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 YWHAZP1-201ENST00000556286 722 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.4□□□□□ -2.19
CASQ1P31415 SUB1P4-201ENST00000566062 339 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 AL358072.1-201ENST00000604156 575 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 AL163152.1-201ENST00000642001 374 ntBASIC1.4□□□□□ -2.19
CASQ1P31415 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
CASQ1P31415 AP000560.1-201ENST00000624150 1937 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CASQ1P31415 RSL24D1P4-201ENST00000400938 484 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 MTCO1P17-201ENST00000411522 491 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 AL359704.1-201ENST00000411586 781 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 RPL37P10-201ENST00000412884 288 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.39□□□□□ -2.19
CASQ1P31415 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.39□□□□□ -2.19
CASQ1P31415 TOMM22P2-201ENST00000430735 237 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.39□□□□□ -2.19
CASQ1P31415 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.39□□□□□ -2.19
CASQ1P31415 UBL5P3-201ENST00000475112 231 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 RPL30P7-201ENST00000479312 323 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 AP001025.1-201ENST00000486139 332 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.39□□□□□ -2.19
CASQ1P31415 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.39□□□□□ -2.19
CASQ1P31415 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.39□□□□□ -2.19
CASQ1P31415 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CASQ1P31415 AP003033.1-201ENST00000527244 415 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.39□□□□□ -2.19
CASQ1P31415 AC104985.3-201ENST00000623479 597 ntBASIC1.39□□□□□ -2.19
CASQ1P31415 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CASQ1P31415 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.38□□□□□ -2.19
CASQ1P31415 AP000542.1-201ENST00000448473 371 ntBASIC1.38□□□□□ -2.19
CASQ1P31415 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CASQ1P31415 RPL30P6-201ENST00000475925 342 ntBASIC1.38□□□□□ -2.19
CASQ1P31415 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.38□□□□□ -2.19
CASQ1P31415 RPS29P21-201ENST00000496272 170 ntBASIC1.38□□□□□ -2.19
CASQ1P31415 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.38□□□□□ -2.19
CASQ1P31415 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.38□□□□□ -2.19
CASQ1P31415 AC090821.2-201ENST00000523552 176 ntBASIC1.38□□□□□ -2.19
CASQ1P31415 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.38□□□□□ -2.19
CASQ1P31415 AC023813.2-201ENST00000564321 469 ntBASIC1.38□□□□□ -2.19
CASQ1P31415 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.38□□□□□ -2.19
CASQ1P31415 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.38□□□□□ -2.19
CASQ1P31415 MIR8063-201ENST00000621930 81 ntBASIC1.38□□□□□ -2.19
CASQ1P31415 AL136313.1-201ENST00000624804 202 ntBASIC1.38□□□□□ -2.19
CASQ1P31415 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CASQ1P31415 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CASQ1P31415 AL589826.1-201ENST00000340697 249 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 RNA5SP493-201ENST00000364115 91 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 Y_RNA.578-201ENST00000390903 88 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 RNU6-1025P-201ENST00000410629 104 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CASQ1P31415 AC009518.2-201ENST00000418056 731 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 AC083875.1-201ENST00000419509 405 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 RPL30P1-201ENST00000488676 339 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 HMGB1P30-201ENST00000492455 606 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 MTCYBP18-201ENST00000501056 747 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 RNU6-1315P-201ENST00000517187 99 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.37□□□□□ -2.19
CASQ1P31415 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.37□□□□□ -2.19
CASQ1P31415 SNORA77B-201ENST00000578179 125 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 MIR3683-201ENST00000580847 82 ntBASIC1.37□□□□□ -2.19
CASQ1P31415 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms