Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 Y_RNA.358-201ENST00000365491 99 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 Y_RNA.471-201ENST00000384312 102 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 MIR3065-201ENST00000390137 79 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 MIR670-201ENST00000390142 98 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC12P31275 RN7SKP202-201ENST00000410439 330 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC12P31275 RBMY1KP-201ENST00000423480 476 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC12P31275 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC12P31275 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC12P31275 SNORA25.11-201ENST00000515935 105 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 SNORA40.15-201ENST00000516884 107 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 RN7SKP272-201ENST00000516988 232 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 AC023632.4-201ENST00000517783 191 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC12P31275 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC12P31275 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC12P31275 RAC1P9-201ENST00000604990 392 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 AC062037.2-201ENST00000610137 73 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 AC107871.2-201ENST00000612894 502 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC12P31275 AC073308.1-201ENST00000623696 305 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC12P31275 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC12P31275 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC12P31275 AF117829.1-206ENST00000621883 3802 ntBASIC3.86□□□□□ -1.79
HOXC12P31275 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
HOXC12P31275 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC12P31275 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXC12P31275 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC12P31275 Z75746.1-201ENST00000440243 2080 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HOXC12P31275 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC12P31275 SPRR2C-201ENST00000290702 219 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 RNA5SP175-201ENST00000364275 119 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 Y_RNA.396-201ENST00000383949 103 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 RPS4XP3-201ENST00000398541 413 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 FTH1P15-201ENST00000406984 280 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 RNU6-628P-201ENST00000410675 107 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXC12P31275 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC12P31275 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXC12P31275 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC12P31275 AL031659.1-201ENST00000447075 539 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 AL358232.1-201ENST00000448030 501 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC12P31275 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC12P31275 AC074250.1-201ENST00000511117 192 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC12P31275 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC12P31275 RNU6-581P-201ENST00000516214 105 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 IGHV3-76-201ENST00000522465 295 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXC12P31275 HIGD1AP1-201ENST00000550979 275 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC12P31275 AC090517.1-201ENST00000569307 266 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 MIR3609-201ENST00000582661 80 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 AC078899.3-201ENST00000599065 212 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 RPL23AP78-201ENST00000599928 470 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 AC079587.1-201ENST00000603846 277 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 AC024581.2-201ENST00000619986 252 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 MIR6075-201ENST00000620782 95 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.85□□□□□ -1.79
HOXC12P31275 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC12P31275 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC12P31275 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
HOXC12P31275 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXC12P31275 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXC12P31275 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXC12P31275 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXC12P31275 AP000560.1-201ENST00000624150 1937 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 Y_RNA.64-201ENST00000362845 102 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 RNA5SP307-201ENST00000362863 116 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 RNU6-770P-201ENST00000363929 105 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 Y_RNA.276-201ENST00000364732 109 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 U3.13-201ENST00000364804 214 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 SNORA62.3-201ENST00000365110 153 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 SNORA70.4-201ENST00000365509 134 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 RNU6-968P-201ENST00000384076 107 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 SNORA1.3-201ENST00000384676 136 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 AL138878.1-201ENST00000405131 347 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 AC074117.2-201ENST00000417130 397 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 Z82188.1-201ENST00000436709 154 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 HMGN2P20-201ENST00000437531 273 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 CYCSP32-201ENST00000440548 321 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXC12P31275 AL445433.1-201ENST00000457507 257 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 snoU13.30-201ENST00000458951 104 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 TOMM22P6-201ENST00000465035 409 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 RN7SL132P-201ENST00000478131 296 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 MRPL42P6-201ENST00000486397 371 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 RN7SL283P-201ENST00000489055 303 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 Y_RNA.668-201ENST00000516233 93 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 RNU6-897P-201ENST00000517135 105 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 RNU6-794P-201ENST00000517261 64 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms