Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.95□□□□□ -1.94
HOXA13P31271 RNA5SP320-201ENST00000516263 124 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 RNU6-1178P-201ENST00000516674 107 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 RNU6-835P-201ENST00000516974 104 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 RNU6-685P-201ENST00000517088 95 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 AC109635.3-201ENST00000529536 185 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 AC243972.3-201ENST00000539655 198 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 MIR4703-201ENST00000577728 79 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 RMST_3.1-201ENST00000611651 109 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 AC107871.2-201ENST00000612894 502 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA13P31271 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA13P31271 MIR1321-201ENST00000637766 79 ntBASIC2.95□□□□□ -1.94
HOXA13P31271 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA13P31271 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA13P31271 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA13P31271 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA13P31271 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA13P31271 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA13P31271 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA13P31271 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXA13P31271 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA13P31271 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
HOXA13P31271 AC008669.1-201ENST00000565823 2178 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 SNORA51.4-201ENST00000364993 124 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 SNORD37.1-201ENST00000390968 65 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AL078595.1-201ENST00000404458 226 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 RNU6-193P-201ENST00000410977 107 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AC023141.4-201ENST00000412031 328 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA13P31271 MTCYBP8-201ENST00000422855 651 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AL365496.1-201ENST00000426885 215 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA13P31271 AC016691.1-201ENST00000441321 413 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXA13P31271 WASF1P1-201ENST00000447560 1131 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA13P31271 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA13P31271 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA13P31271 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA13P31271 RPS26P21-201ENST00000475397 348 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA13P31271 AC092436.1-201ENST00000506450 503 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AC009901.1-201ENST00000506703 541 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA13P31271 AC105417.1-201ENST00000514691 285 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 RNU6-1281P-201ENST00000516223 105 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 RNU6-703P-201ENST00000516946 107 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 SUB1P1-201ENST00000524415 382 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA13P31271 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.94□□□□□ -1.94
HOXA13P31271 AL157687.1-201ENST00000554853 619 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA13P31271 AL121821.2-201ENST00000556081 394 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA13P31271 AC007938.3-201ENST00000604965 623 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AC005609.4-201ENST00000625071 447 ntBASIC2.94□□□□□ -1.94
HOXA13P31271 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXA13P31271 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXA13P31271 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXA13P31271 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXA13P31271 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
HOXA13P31271 HSPA8P4-201ENST00000511877 1920 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 AC099654.7-201ENST00000635788 2127 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA13P31271 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA13P31271 RNU6-451P-201ENST00000362921 107 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 RNU6-996P-201ENST00000365438 107 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 DYNLT3P1-201ENST00000378574 347 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 SNORD21-201ENST00000383953 95 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 MIR578-201ENST00000384828 96 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 RNU4-46P-201ENST00000410818 138 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 RNU6-1068P-201ENST00000410958 103 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 TOMM20P4-201ENST00000427861 435 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA13P31271 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA13P31271 BTF3P15-201ENST00000455606 336 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 AC112206.3-201ENST00000514578 389 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 SNORA40.12-201ENST00000516329 111 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 AP003034.1-201ENST00000534621 422 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA13P31271 AC021739.1-201ENST00000559631 174 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 LINC00933-203ENST00000559812 219 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA13P31271 MIR548S-201ENST00000581352 82 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXA13P31271 RPL23AP78-201ENST00000599928 470 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 AC022306.2-201ENST00000617563 647 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 uc_338.11-201ENST00000619132 160 ntBASIC2.93□□□□□ -1.94
HOXA13P31271 Y_RNA.88-201ENST00000363029 99 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 RNA5SP126-201ENST00000365092 109 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 RNU6-898P-201ENST00000365627 104 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 SNORA69-201ENST00000383895 132 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms