Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MRPL42P2-201ENST00000403169 426 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 RNU6-195P-201ENST00000411352 109 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 RNA5SP270-201ENST00000411361 118 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AC023141.4-201ENST00000412031 328 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AL356379.1-201ENST00000414105 126 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AL445685.2-201ENST00000422551 342 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 SKA2P1-201ENST00000425592 390 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.03□□□□□ -2.08
HOXA9P31269 HMGB1P9-201ENST00000429856 646 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AC009961.2-201ENST00000435771 251 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 SNRPEP9-201ENST00000436794 238 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.03□□□□□ -2.08
HOXA9P31269 AL033528.1-201ENST00000453780 140 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 SNORD42A-201ENST00000459584 64 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 MRPS17P3-201ENST00000465453 385 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXA9P31269 RNU2-10P-201ENST00000516375 211 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXA9P31269 AC005771.1-201ENST00000585581 349 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AC078899.2-201ENST00000595282 212 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AC010620.1-201ENST00000601088 1102 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 AL589994.2-201ENST00000621124 579 ntBASIC2.03□□□□□ -2.08
HOXA9P31269 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXA9P31269 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HOXA9P31269 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXA9P31269 RNU4-91P-201ENST00000364778 135 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 RNY4P34-201ENST00000364779 95 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 RNU6-169P-201ENST00000365336 107 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 RNU6-946P-201ENST00000383878 107 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 SNORA40.18-201ENST00000391200 128 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 MIR888-201ENST00000401186 77 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 RNU6-248P-201ENST00000410720 107 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXA9P31269 AC114491.1-201ENST00000416095 246 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AC006366.1-201ENST00000422002 759 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AC104651.1-201ENST00000427559 735 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 USP9YP8-201ENST00000441913 500 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AC124916.1-201ENST00000444020 547 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXA9P31269 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXA9P31269 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 MTCO2P29-201ENST00000465212 189 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXA9P31269 AC139453.3-201ENST00000493276 369 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXA9P31269 AC091965.2-201ENST00000512324 613 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 RNA5SP165-201ENST00000517142 115 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AC022616.3-201ENST00000523940 148 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXA9P31269 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXA9P31269 AC010186.2-204ENST00000537668 439 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXA9P31269 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXA9P31269 MIR3683-201ENST00000580847 82 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL670379.6-201ENST00000603753 252 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL670379.11-201ENST00000604059 253 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AC008162.1-201ENST00000604718 254 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL670379.1-201ENST00000604752 252 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL670379.5-201ENST00000605253 252 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL670379.12-201ENST00000605291 253 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL670379.8-201ENST00000605353 252 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL670379.7-201ENST00000605823 252 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AP002360.4-201ENST00000606980 481 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL365204.3-201ENST00000612448 685 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AC008250.2-201ENST00000615261 205 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AP001486.3-201ENST00000615334 372 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 AL162373.1-201ENST00000620433 407 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 SDR42E1P4-201ENST00000620894 481 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 Z69908.1-201ENST00000622603 247 ntBASIC2.02□□□□□ -2.09
HOXA9P31269 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXA9P31269 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HOXA9P31269 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HOXA9P31269 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXA9P31269 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
HOXA9P31269 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXA9P31269 HSPE1P11-201ENST00000339579 310 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 RNU6-778P-201ENST00000363269 103 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 SNORA16B-201ENST00000364674 135 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 MIR1302-8-201ENST00000408342 128 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 RN7SKP142-201ENST00000411236 328 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 RPS12P24-201ENST00000412619 387 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AC092809.3-201ENST00000415453 231 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXA9P31269 AC119618.1-201ENST00000434191 222 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXA9P31269 USP9YP29-201ENST00000445112 563 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXA9P31269 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.01□□□□□ -2.09
HOXA9P31269 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.01□□□□□ -2.09
HOXA9P31269 RPL39P36-201ENST00000490784 156 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AC026801.1-201ENST00000497178 464 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXA9P31269 AC107393.1-201ENST00000512403 346 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXA9P31269 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXA9P31269 AC117532.1-201ENST00000514638 323 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 FAM92A1P1-201ENST00000528023 890 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms