Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 RNU6-798P-201ENST00000516912 103 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A3P25940 AP004247.1-201ENST00000531556 1289 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A3P25940 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A3P25940 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.43□□□□□ -2.18
COL5A3P25940 MIR3915-201ENST00000578518 97 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A3P25940 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A3P25940 AL096840.1-201ENST00000603287 93 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC018714.1-201ENST00000605028 208 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC096772.1-201ENST00000609146 564 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A3P25940 SDR42E1P2-201ENST00000614861 481 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A3P25940 SDR42E1P4-201ENST00000620894 481 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AF246928.1-201ENST00000623768 87 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC007494.3-201ENST00000624660 743 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC019226.1-201ENST00000625666 515 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
COL5A3P25940 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
COL5A3P25940 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL5A3P25940 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.42□□□□□ -2.18
COL5A3P25940 Y_RNA.302-201ENST00000364997 102 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 RNU6-359P-201ENST00000365466 108 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 RNU6-744P-201ENST00000365557 107 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.42□□□□□ -2.18
COL5A3P25940 RNU6-1316P-201ENST00000384242 108 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 RNU6-198P-201ENST00000384258 104 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 RNA5SP465-201ENST00000391195 109 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.42□□□□□ -2.18
COL5A3P25940 MIR1285-1-201ENST00000408593 84 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 RN7SKP266-201ENST00000410232 287 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A3P25940 AC098592.1-201ENST00000419352 333 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AL445567.1-201ENST00000439121 144 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 GPM6BP3-201ENST00000442797 145 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AL592447.1-201ENST00000447592 540 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A3P25940 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A3P25940 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.42□□□□□ -2.18
COL5A3P25940 HMGB1P36-201ENST00000487709 576 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AC108078.1-201ENST00000508073 725 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 Y_RNA.681-201ENST00000516445 113 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 RNU6-714P-201ENST00000516963 103 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A3P25940 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL5A3P25940 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A3P25940 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.42□□□□□ -2.18
COL5A3P25940 AC136618.2-201ENST00000575091 400 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 VN1R107P-201ENST00000601784 209 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AL596327.1-201ENST00000603629 213 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AL357094.1-201ENST00000603845 844 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AC004067.1-201ENST00000608733 700 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AP000254.1-201ENST00000609934 520 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AC008147.4-201ENST00000617570 1204 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 MIR6130-201ENST00000619419 109 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AC008133.2-201ENST00000624540 351 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AC019226.2-201ENST00000625973 424 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AL445523.1-201ENST00000451184 1362 ntBASIC1.42□□□□□ -2.18
COL5A3P25940 AC009812.4-201ENST00000569134 1805 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 RNU6-931P-201ENST00000363850 107 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL5A3P25940 Y_RNA.393-201ENST00000383936 102 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 SNORA70.7-201ENST00000384159 133 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 RNU6-432P-201ENST00000384196 109 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 RNY3P9-201ENST00000384727 106 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.41□□□□□ -2.18
COL5A3P25940 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.41□□□□□ -2.18
COL5A3P25940 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.41□□□□□ -2.18
COL5A3P25940 MTND1P9-201ENST00000453775 944 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 AL583843.1-201ENST00000456070 346 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 SNRPFP3-201ENST00000457792 225 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.41□□□□□ -2.18
COL5A3P25940 RNU7-59P-201ENST00000459101 61 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 MTND3P7-201ENST00000474435 343 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 RPL30P6-201ENST00000475925 342 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.41□□□□□ -2.18
COL5A3P25940 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.41□□□□□ -2.18
COL5A3P25940 RPF2P2-201ENST00000504693 896 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 RNA5SP436-201ENST00000516020 115 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 AC026407.1-201ENST00000518369 204 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.41□□□□□ -2.18
COL5A3P25940 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.41□□□□□ -2.18
COL5A3P25940 AC007834.2-201ENST00000536310 343 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.41□□□□□ -2.18
COL5A3P25940 AC090616.2-202ENST00000584248 222 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 NIFKP6-201ENST00000598115 845 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 U73023.1-201ENST00000603134 700 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.41□□□□□ -2.18
COL5A3P25940 AC091965.5-201ENST00000624785 342 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.41□□□□□ -2.18
COL5A3P25940 CCT4P2-201ENST00000233836 1548 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 MTND5P33-201ENST00000571250 1450 ntBASIC1.41□□□□□ -2.18
COL5A3P25940 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL5A3P25940 Y_RNA.18-201ENST00000362461 102 ntBASIC1.4□□□□□ -2.18
COL5A3P25940 MIR325-201ENST00000385260 98 ntBASIC1.4□□□□□ -2.18
COL5A3P25940 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.18
COL5A3P25940 AL590084.2-201ENST00000401481 382 ntBASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms