Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL627311.1-201ENST00000431514 115 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.18□□□□□ -2.06
XRCC1P18887 AC004383.1-201ENST00000438135 289 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 RPS15AP9-201ENST00000439856 381 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.18□□□□□ -2.06
XRCC1P18887 IPO7P1-201ENST00000442031 636 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.18□□□□□ -2.06
XRCC1P18887 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.18□□□□□ -2.06
XRCC1P18887 AC090096.1-201ENST00000489168 390 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.18□□□□□ -2.06
XRCC1P18887 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.18□□□□□ -2.06
XRCC1P18887 RNU6-123P-201ENST00000516163 102 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 RNU5B-3P-201ENST00000516601 115 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC090572.1-201ENST00000519251 160 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC060788.1-201ENST00000521318 469 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.18□□□□□ -2.06
XRCC1P18887 AP002453.2-201ENST00000533503 320 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 OSBPL9P5-201ENST00000542581 171 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC012414.6-201ENST00000568241 401 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.18□□□□□ -2.06
XRCC1P18887 MIR548AC-201ENST00000585049 88 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC245014.2-201ENST00000603689 287 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AL138889.2-201ENST00000603883 242 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC246785.4-201ENST00000605374 287 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC126118.1-201ENST00000607744 628 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC244517.12-201ENST00000623581 663 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC138627.2-201ENST00000624202 601 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AL157786.1-207ENST00000627771 695 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
XRCC1P18887 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
XRCC1P18887 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
XRCC1P18887 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.17□□□□□ -2.06
XRCC1P18887 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
XRCC1P18887 RNU6-1097P-201ENST00000363586 107 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 RNU6-220P-201ENST00000390919 107 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 CISD1P1-201ENST00000393907 327 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
XRCC1P18887 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 Y_RNA.623-201ENST00000411128 95 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 HMGB3P2-201ENST00000411913 584 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.17□□□□□ -2.06
XRCC1P18887 MTND3P17-201ENST00000416968 344 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AL365338.1-201ENST00000422282 858 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 MTCYBP5-201ENST00000423752 1135 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 MTCO3P30-201ENST00000426425 670 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 ISCA1P6-201ENST00000427740 390 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 Z98742.2-201ENST00000431564 187 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.17□□□□□ -2.06
XRCC1P18887 GPR143P-201ENST00000434155 205 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AL353706.1-201ENST00000436728 494 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
XRCC1P18887 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
XRCC1P18887 AC096638.1-201ENST00000444678 216 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.17□□□□□ -2.06
XRCC1P18887 AP001324.2-201ENST00000461163 319 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.17□□□□□ -2.06
XRCC1P18887 AC018437.1-201ENST00000492214 406 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC022493.1-201ENST00000492984 337 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 RPS29P21-201ENST00000496272 170 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.17□□□□□ -2.06
XRCC1P18887 FAM92A1P2-202ENST00000504766 877 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.17□□□□□ -2.06
XRCC1P18887 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.17□□□□□ -2.06
XRCC1P18887 RANP3-201ENST00000530970 276 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC010186.2-204ENST00000537668 439 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC008521.1-201ENST00000587471 187 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC098848.2-201ENST00000588023 330 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 CLIC4P2-201ENST00000601934 717 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AL590229.1-201ENST00000603497 542 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 SEPT7P9-203ENST00000604116 343 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AL670379.10-201ENST00000604330 253 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AL670379.9-201ENST00000605428 253 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC008147.4-201ENST00000617570 1204 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
XRCC1P18887 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
XRCC1P18887 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
XRCC1P18887 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.16□□□□□ -2.06
XRCC1P18887 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
XRCC1P18887 RNU6-108P-201ENST00000365558 107 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
XRCC1P18887 RNU6-297P-201ENST00000384636 107 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 MIR218-1-201ENST00000384999 110 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 AF228730.1-201ENST00000397972 663 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 RNU6-248P-201ENST00000410720 107 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.16□□□□□ -2.06
XRCC1P18887 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
XRCC1P18887 AL353621.1-201ENST00000418219 243 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.16□□□□□ -2.06
XRCC1P18887 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.16□□□□□ -2.06
XRCC1P18887 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.16□□□□□ -2.06
XRCC1P18887 MTATP6P16-201ENST00000434543 526 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 IFNA11P-201ENST00000446352 526 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 AL513124.1-201ENST00000450410 614 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
XRCC1P18887 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.16□□□□□ -2.06
XRCC1P18887 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.16□□□□□ -2.06
XRCC1P18887 AL583843.1-201ENST00000456070 346 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms