Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.73□□□□□ -1.81
ATF3P18847 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.73□□□□□ -1.81
ATF3P18847 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.73□□□□□ -1.81
ATF3P18847 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATF3P18847 MIR512-1-201ENST00000384913 84 ntBASIC3.73□□□□□ -1.81
ATF3P18847 SNORA16.2-201ENST00000390991 127 ntBASIC3.73□□□□□ -1.81
ATF3P18847 SNORD115-47-201ENST00000391226 86 ntBASIC3.73□□□□□ -1.81
ATF3P18847 MIR1289-2-201ENST00000408360 111 ntBASIC3.73□□□□□ -1.81
ATF3P18847 AL135786.1-201ENST00000415892 214 ntBASIC3.73□□□□□ -1.81
ATF3P18847 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.73□□□□□ -1.81
ATF3P18847 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.73□□□□□ -1.81
ATF3P18847 AL139415.2-201ENST00000431968 163 ntBASIC3.73□□□□□ -1.81
ATF3P18847 BX679664.1-201ENST00000434429 253 ntBASIC3.73□□□□□ -1.81
ATF3P18847 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.73□□□□□ -1.81
ATF3P18847 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.73□□□□□ -1.81
ATF3P18847 RPL38P4-201ENST00000502376 214 ntBASIC3.73□□□□□ -1.81
ATF3P18847 AC091885.1-201ENST00000506658 268 ntBASIC3.73□□□□□ -1.81
ATF3P18847 MTND4LP22-201ENST00000508209 276 ntBASIC3.73□□□□□ -1.81
ATF3P18847 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.73□□□□□ -1.81
ATF3P18847 RNU2-69P-201ENST00000516061 100 ntBASIC3.73□□□□□ -1.81
ATF3P18847 BNIP3P6-201ENST00000549284 499 ntBASIC3.73□□□□□ -1.81
ATF3P18847 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.73□□□□□ -1.81
ATF3P18847 LINC00933-203ENST00000559812 219 ntBASIC3.73□□□□□ -1.81
ATF3P18847 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.73□□□□□ -1.81
ATF3P18847 ZNF861P-201ENST00000588126 639 ntBASIC3.73□□□□□ -1.81
ATF3P18847 MIR6134-201ENST00000617606 109 ntBASIC3.73□□□□□ -1.81
ATF3P18847 MIR3199-2-201ENST00000636243 86 ntBASIC3.73□□□□□ -1.81
ATF3P18847 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
ATF3P18847 ADAM3A-203ENST00000461344 2157 ntBASIC3.73□□□□□ -1.81
ATF3P18847 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.72□□□□□ -1.81
ATF3P18847 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.72□□□□□ -1.81
ATF3P18847 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.72□□□□□ -1.81
ATF3P18847 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATF3P18847 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.72□□□□□ -1.81
ATF3P18847 Y_RNA.399-201ENST00000383955 105 ntBASIC3.72□□□□□ -1.81
ATF3P18847 RNA5SP354-201ENST00000391247 136 ntBASIC3.72□□□□□ -1.81
ATF3P18847 SAR1AP2-201ENST00000392696 594 ntBASIC3.72□□□□□ -1.81
ATF3P18847 RNU6-607P-201ENST00000411283 108 ntBASIC3.72□□□□□ -1.81
ATF3P18847 SNRPEP10-201ENST00000420249 274 ntBASIC3.72□□□□□ -1.81
ATF3P18847 AL513043.1-201ENST00000439124 535 ntBASIC3.72□□□□□ -1.81
ATF3P18847 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.72□□□□□ -1.81
ATF3P18847 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATF3P18847 AC006539.3-201ENST00000454258 129 ntBASIC3.72□□□□□ -1.81
ATF3P18847 AC011005.2-201ENST00000487324 359 ntBASIC3.72□□□□□ -1.81
ATF3P18847 RPS27P26-201ENST00000494583 239 ntBASIC3.72□□□□□ -1.81
ATF3P18847 AC079140.5-201ENST00000507882 310 ntBASIC3.72□□□□□ -1.81
ATF3P18847 AC074344.1-201ENST00000512823 224 ntBASIC3.72□□□□□ -1.81
ATF3P18847 RNU6-718P-201ENST00000516166 105 ntBASIC3.72□□□□□ -1.81
ATF3P18847 MIR892C-201ENST00000516410 77 ntBASIC3.72□□□□□ -1.81
ATF3P18847 MTND4LP26-201ENST00000518144 282 ntBASIC3.72□□□□□ -1.81
ATF3P18847 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.72□□□□□ -1.81
ATF3P18847 MTND1P35-201ENST00000526739 508 ntBASIC3.72□□□□□ -1.81
ATF3P18847 AC021739.1-201ENST00000559631 174 ntBASIC3.72□□□□□ -1.81
ATF3P18847 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.72□□□□□ -1.81
ATF3P18847 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.72□□□□□ -1.81
ATF3P18847 MIR5583-1-201ENST00000580941 59 ntBASIC3.72□□□□□ -1.81
ATF3P18847 MIR3941-201ENST00000582572 103 ntBASIC3.72□□□□□ -1.81
ATF3P18847 AC012119.1-201ENST00000603184 222 ntBASIC3.72□□□□□ -1.81
ATF3P18847 AL133393.1-201ENST00000603277 287 ntBASIC3.72□□□□□ -1.81
ATF3P18847 AP003400.5-201ENST00000624827 617 ntBASIC3.72□□□□□ -1.81
ATF3P18847 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATF3P18847 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATF3P18847 AC108206.1-201ENST00000570186 4159 ntBASIC3.71□□□□□ -1.81
ATF3P18847 RNU6-451P-201ENST00000362921 107 ntBASIC3.71□□□□□ -1.82
ATF3P18847 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATF3P18847 Y_RNA.453-201ENST00000384223 109 ntBASIC3.71□□□□□ -1.82
ATF3P18847 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ATF3P18847 BTF3P7-201ENST00000407097 488 ntBASIC3.71□□□□□ -1.82
ATF3P18847 RNU6-1068P-201ENST00000410958 103 ntBASIC3.71□□□□□ -1.82
ATF3P18847 AC096649.2-201ENST00000416186 393 ntBASIC3.71□□□□□ -1.82
ATF3P18847 MTATP6P13-201ENST00000438531 667 ntBASIC3.71□□□□□ -1.82
ATF3P18847 CALM1P1-201ENST00000442082 433 ntBASIC3.71□□□□□ -1.82
ATF3P18847 PRPS1P1-201ENST00000445305 876 ntBASIC3.71□□□□□ -1.82
ATF3P18847 BTF3P15-201ENST00000455606 336 ntBASIC3.71□□□□□ -1.82
ATF3P18847 MTND3P25-201ENST00000509243 135 ntBASIC3.71□□□□□ -1.82
ATF3P18847 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.71□□□□□ -1.82
ATF3P18847 AC104027.1-201ENST00000521887 300 ntBASIC3.71□□□□□ -1.82
ATF3P18847 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.71□□□□□ -1.82
ATF3P18847 AC107304.1-201ENST00000604229 296 ntBASIC3.71□□□□□ -1.82
ATF3P18847 AC087045.1-201ENST00000605856 382 ntBASIC3.71□□□□□ -1.82
ATF3P18847 AC026585.1-201ENST00000619582 524 ntBASIC3.71□□□□□ -1.82
ATF3P18847 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATF3P18847 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATF3P18847 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATF3P18847 CDC27P3-201ENST00000635418 1910 ntBASIC3.7□□□□□ -1.82
ATF3P18847 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATF3P18847 RNU1-75P-201ENST00000347264 129 ntBASIC3.7□□□□□ -1.82
ATF3P18847 Y_RNA.38-201ENST00000362617 102 ntBASIC3.7□□□□□ -1.82
ATF3P18847 Y_RNA.89-201ENST00000363031 102 ntBASIC3.7□□□□□ -1.82
ATF3P18847 RNU6-38P-201ENST00000384085 107 ntBASIC3.7□□□□□ -1.82
ATF3P18847 Y_RNA.480-201ENST00000384364 102 ntBASIC3.7□□□□□ -1.82
ATF3P18847 MIR10A-201ENST00000385043 110 ntBASIC3.7□□□□□ -1.82
ATF3P18847 MIR514A2-201ENST00000385131 88 ntBASIC3.7□□□□□ -1.82
ATF3P18847 MIR514A3-201ENST00000385132 88 ntBASIC3.7□□□□□ -1.82
ATF3P18847 MIR1277-201ENST00000408536 78 ntBASIC3.7□□□□□ -1.82
ATF3P18847 RN7SKP223-201ENST00000410582 62 ntBASIC3.7□□□□□ -1.82
ATF3P18847 RNU2-49P-201ENST00000410666 184 ntBASIC3.7□□□□□ -1.82
ATF3P18847 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.7□□□□□ -1.82
ATF3P18847 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.7□□□□□ -1.82
ATF3P18847 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms