Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CYCSP48-201ENST00000417124 323 ntBASIC2.42□□□□□ -2.02
VCLP18206 PIGFP2-201ENST00000421400 651 ntBASIC2.42□□□□□ -2.02
VCLP18206 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VCLP18206 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.42□□□□□ -2.02
VCLP18206 MTATP6P17-201ENST00000431030 672 ntBASIC2.42□□□□□ -2.02
VCLP18206 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.42□□□□□ -2.02
VCLP18206 MTND1P26-201ENST00000440488 538 ntBASIC2.42□□□□□ -2.02
VCLP18206 AC244505.5-201ENST00000443639 207 ntBASIC2.42□□□□□ -2.02
VCLP18206 AC104058.1-201ENST00000448028 297 ntBASIC2.42□□□□□ -2.02
VCLP18206 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.42□□□□□ -2.02
VCLP18206 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.42□□□□□ -2.02
VCLP18206 AC006026.2-201ENST00000457376 180 ntBASIC2.42□□□□□ -2.02
VCLP18206 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.42□□□□□ -2.02
VCLP18206 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.42□□□□□ -2.02
VCLP18206 SMURF2P1-201ENST00000514992 481 ntBASIC2.42□□□□□ -2.02
VCLP18206 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.42□□□□□ -2.02
VCLP18206 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.42□□□□□ -2.02
VCLP18206 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.42□□□□□ -2.02
VCLP18206 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.42□□□□□ -2.02
VCLP18206 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.42□□□□□ -2.02
VCLP18206 AC005332.10-201ENST00000612725 619 ntBASIC2.42□□□□□ -2.02
VCLP18206 AC072046.2-201ENST00000618366 268 ntBASIC2.42□□□□□ -2.02
VCLP18206 AL359740.1-201ENST00000624340 592 ntBASIC2.42□□□□□ -2.02
VCLP18206 MIR3529-201ENST00000637713 78 ntBASIC2.42□□□□□ -2.02
VCLP18206 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VCLP18206 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VCLP18206 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VCLP18206 MIR449A-201ENST00000362113 91 ntBASIC2.41□□□□□ -2.02
VCLP18206 RNU4-82P-201ENST00000362443 140 ntBASIC2.41□□□□□ -2.02
VCLP18206 RNU6-1287P-201ENST00000362914 107 ntBASIC2.41□□□□□ -2.02
VCLP18206 SNORD114-30-201ENST00000364448 72 ntBASIC2.41□□□□□ -2.02
VCLP18206 RNA5SP125-201ENST00000364843 120 ntBASIC2.41□□□□□ -2.02
VCLP18206 Y_RNA.367-201ENST00000365544 101 ntBASIC2.41□□□□□ -2.02
VCLP18206 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VCLP18206 RNU6-116P-201ENST00000384042 109 ntBASIC2.41□□□□□ -2.02
VCLP18206 RNU6-72P-201ENST00000384285 79 ntBASIC2.41□□□□□ -2.02
VCLP18206 RNU6-1060P-201ENST00000384664 107 ntBASIC2.41□□□□□ -2.02
VCLP18206 RNY3P9-201ENST00000384727 106 ntBASIC2.41□□□□□ -2.02
VCLP18206 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VCLP18206 AL031779.1-201ENST00000415663 330 ntBASIC2.41□□□□□ -2.02
VCLP18206 MTND1P23-201ENST00000416931 372 ntBASIC2.41□□□□□ -2.02
VCLP18206 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.41□□□□□ -2.02
VCLP18206 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.41□□□□□ -2.02
VCLP18206 AC003685.2-201ENST00000422795 395 ntBASIC2.41□□□□□ -2.02
VCLP18206 MTCO3P5-201ENST00000433620 714 ntBASIC2.41□□□□□ -2.02
VCLP18206 KATNBL1P3-201ENST00000443475 909 ntBASIC2.41□□□□□ -2.02
VCLP18206 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.41□□□□□ -2.02
VCLP18206 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.41□□□□□ -2.02
VCLP18206 MTCYBP1-201ENST00000454315 1119 ntBASIC2.41□□□□□ -2.02
VCLP18206 AC022364.2-201ENST00000457963 554 ntBASIC2.41□□□□□ -2.02
VCLP18206 RNU7-182P-201ENST00000459009 62 ntBASIC2.41□□□□□ -2.02
VCLP18206 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.41□□□□□ -2.02
VCLP18206 MED28P2-201ENST00000475771 317 ntBASIC2.41□□□□□ -2.02
VCLP18206 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.41□□□□□ -2.02
VCLP18206 CKS1BP2-201ENST00000497342 240 ntBASIC2.41□□□□□ -2.02
VCLP18206 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.41□□□□□ -2.02
VCLP18206 Y_RNA.695-201ENST00000516715 107 ntBASIC2.41□□□□□ -2.02
VCLP18206 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.41□□□□□ -2.02
VCLP18206 AC040904.1-201ENST00000590850 223 ntBASIC2.41□□□□□ -2.02
VCLP18206 Z84480.1-201ENST00000605131 311 ntBASIC2.41□□□□□ -2.02
VCLP18206 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.41□□□□□ -2.02
VCLP18206 AC006566.1-201ENST00000608943 513 ntBASIC2.41□□□□□ -2.02
VCLP18206 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.41□□□□□ -2.02
VCLP18206 AC010378.1-201ENST00000619270 362 ntBASIC2.41□□□□□ -2.02
VCLP18206 MIR5739-201ENST00000619803 80 ntBASIC2.41□□□□□ -2.02
VCLP18206 SCARNA4-202ENST00000625402 129 ntBASIC2.41□□□□□ -2.02
VCLP18206 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.41□□□□□ -2.02
VCLP18206 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.41□□□□□ -2.02
VCLP18206 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.41□□□□□ -2.02
VCLP18206 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VCLP18206 SNORD114-19-201ENST00000363072 75 ntBASIC2.4□□□□□ -2.03
VCLP18206 SNORA62.1-201ENST00000364287 154 ntBASIC2.4□□□□□ -2.03
VCLP18206 MIR518C-201ENST00000384822 101 ntBASIC2.4□□□□□ -2.03
VCLP18206 MIR454-201ENST00000390180 115 ntBASIC2.4□□□□□ -2.03
VCLP18206 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
VCLP18206 RNU2-63P-201ENST00000410792 194 ntBASIC2.4□□□□□ -2.03
VCLP18206 OR6C66P-201ENST00000414917 930 ntBASIC2.4□□□□□ -2.03
VCLP18206 AC138623.1-201ENST00000418060 216 ntBASIC2.4□□□□□ -2.03
VCLP18206 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.4□□□□□ -2.03
VCLP18206 AC090960.1-201ENST00000421072 306 ntBASIC2.4□□□□□ -2.03
VCLP18206 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VCLP18206 AC133104.1-201ENST00000429100 218 ntBASIC2.4□□□□□ -2.03
VCLP18206 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.4□□□□□ -2.03
VCLP18206 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.4□□□□□ -2.03
VCLP18206 AP005902.1-201ENST00000521358 186 ntBASIC2.4□□□□□ -2.03
VCLP18206 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.4□□□□□ -2.03
VCLP18206 AL133241.1-201ENST00000556832 487 ntBASIC2.4□□□□□ -2.03
VCLP18206 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.4□□□□□ -2.03
VCLP18206 RPS15AP11-201ENST00000594193 385 ntBASIC2.4□□□□□ -2.03
VCLP18206 AC109347.2-201ENST00000610220 349 ntBASIC2.4□□□□□ -2.03
VCLP18206 AL158063.1-201ENST00000615349 536 ntBASIC2.4□□□□□ -2.03
VCLP18206 AC097520.1-201ENST00000624435 385 ntBASIC2.4□□□□□ -2.03
VCLP18206 AC243829.7-201ENST00000633081 225 ntBASIC2.4□□□□□ -2.03
VCLP18206 SEPT14P19-203ENST00000633205 211 ntBASIC2.4□□□□□ -2.03
VCLP18206 MIR203B-201ENST00000636080 86 ntBASIC2.4□□□□□ -2.03
VCLP18206 MIR3974-201ENST00000637126 96 ntBASIC2.4□□□□□ -2.03
VCLP18206 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.4□□□□□ -2.03
VCLP18206 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VCLP18206 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VCLP18206 AC006020.1-201ENST00000420179 1854 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms