Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RNU6-1282P-201ENST00000516735 96 ntBASIC2.84□□□□□ -1.95
CDH1P12830 SNORD59.2-201ENST00000516873 68 ntBASIC2.84□□□□□ -1.95
CDH1P12830 AC009902.1-201ENST00000519351 183 ntBASIC2.84□□□□□ -1.95
CDH1P12830 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH1P12830 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH1P12830 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.84□□□□□ -1.95
CDH1P12830 H3F3AP1-201ENST00000559984 334 ntBASIC2.84□□□□□ -1.95
CDH1P12830 AC005498.1-201ENST00000592125 465 ntBASIC2.84□□□□□ -1.95
CDH1P12830 AC023043.3-201ENST00000593113 385 ntBASIC2.84□□□□□ -1.95
CDH1P12830 AL161756.2-201ENST00000604597 246 ntBASIC2.84□□□□□ -1.95
CDH1P12830 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDH1P12830 uc_338.5-201ENST00000611839 155 ntBASIC2.84□□□□□ -1.95
CDH1P12830 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.84□□□□□ -1.95
CDH1P12830 AC090617.7-201ENST00000623952 126 ntBASIC2.84□□□□□ -1.95
CDH1P12830 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH1P12830 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH1P12830 TPTEP1-208ENST00000636884 213 ntBASIC2.84□□□□□ -1.95
CDH1P12830 AL359693.1-201ENST00000614959 2407 ntBASIC2.84□□□□□ -1.95
CDH1P12830 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDH1P12830 ZNF807-201ENST00000328088 1707 ntBASIC2.84□□□□□ -1.96
CDH1P12830 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.84□□□□□ -1.96
CDH1P12830 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.84□□□□□ -1.96
CDH1P12830 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.84□□□□□ -1.96
CDH1P12830 AC000403.1-201ENST00000613696 3585 ntBASIC2.84□□□□□ -1.96
CDH1P12830 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH1P12830 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CDH1P12830 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDH1P12830 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH1P12830 Y_RNA.33-201ENST00000362591 102 ntBASIC2.83□□□□□ -1.96
CDH1P12830 RNU6-254P-201ENST00000363377 107 ntBASIC2.83□□□□□ -1.96
CDH1P12830 SNORD113-7-201ENST00000363762 77 ntBASIC2.83□□□□□ -1.96
CDH1P12830 RNU6-395P-201ENST00000365662 106 ntBASIC2.83□□□□□ -1.96
CDH1P12830 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH1P12830 MIR491-201ENST00000384877 84 ntBASIC2.83□□□□□ -1.96
CDH1P12830 MT-TD-201ENST00000387419 68 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AL590004.2-201ENST00000404787 371 ntBASIC2.83□□□□□ -1.96
CDH1P12830 RNU6-607P-201ENST00000411283 108 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH1P12830 AL353621.1-201ENST00000418219 243 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH1P12830 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH1P12830 AL512844.2-201ENST00000433990 593 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH1P12830 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH1P12830 PPP1R2P5-201ENST00000457256 603 ntBASIC2.83□□□□□ -1.96
CDH1P12830 RPS23P3-201ENST00000470993 430 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC117503.1-201ENST00000472241 394 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC008716.1-201ENST00000511084 513 ntBASIC2.83□□□□□ -1.96
CDH1P12830 RNU6-1069P-201ENST00000516612 133 ntBASIC2.83□□□□□ -1.96
CDH1P12830 RNA5SP165-201ENST00000517142 115 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC105029.1-201ENST00000520250 669 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AP000763.2-201ENST00000540641 163 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH1P12830 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH1P12830 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH1P12830 LRRC37A5P-203ENST00000580181 585 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH1P12830 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH1P12830 MIR4325-201ENST00000583049 90 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.83□□□□□ -1.96
CDH1P12830 AC004805.2-201ENST00000605382 482 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC087045.1-201ENST00000605856 382 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AL132765.2-201ENST00000610812 351 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AL121757.2-201ENST00000611223 313 ntBASIC2.83□□□□□ -1.96
CDH1P12830 AC027309.3-201ENST00000623419 351 ntBASIC2.83□□□□□ -1.96
CDH1P12830 FAM35BP-202ENST00000497389 3337 ntBASIC2.83□□□□□ -1.96
CDH1P12830 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH1P12830 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDH1P12830 FTLP6-201ENST00000355274 422 ntBASIC2.82□□□□□ -1.96
CDH1P12830 RNU6-1252P-201ENST00000363054 104 ntBASIC2.82□□□□□ -1.96
CDH1P12830 RNU4-73P-201ENST00000363164 141 ntBASIC2.82□□□□□ -1.96
CDH1P12830 Y_RNA.356-201ENST00000365475 113 ntBASIC2.82□□□□□ -1.96
CDH1P12830 RNU6-217P-201ENST00000384164 104 ntBASIC2.82□□□□□ -1.96
CDH1P12830 RNU6-140P-201ENST00000384566 108 ntBASIC2.82□□□□□ -1.96
CDH1P12830 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDH1P12830 RNU2-3P-201ENST00000410144 191 ntBASIC2.82□□□□□ -1.96
CDH1P12830 RNU6-1025P-201ENST00000410629 104 ntBASIC2.82□□□□□ -1.96
CDH1P12830 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH1P12830 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH1P12830 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.82□□□□□ -1.96
CDH1P12830 SNRPEP9-201ENST00000436794 238 ntBASIC2.82□□□□□ -1.96
CDH1P12830 HMGB1P18-201ENST00000438801 619 ntBASIC2.82□□□□□ -1.96
CDH1P12830 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH1P12830 RPS27AP9-201ENST00000477681 438 ntBASIC2.82□□□□□ -1.96
CDH1P12830 AC139453.3-201ENST00000493276 369 ntBASIC2.82□□□□□ -1.96
CDH1P12830 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH1P12830 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH1P12830 SNORA19.2-201ENST00000516013 114 ntBASIC2.82□□□□□ -1.96
CDH1P12830 RNU1-86P-201ENST00000516108 154 ntBASIC2.82□□□□□ -1.96
CDH1P12830 Y_RNA.691-201ENST00000516611 103 ntBASIC2.82□□□□□ -1.96
CDH1P12830 RNU1-107P-201ENST00000516617 154 ntBASIC2.82□□□□□ -1.96
CDH1P12830 RNU6-1088P-201ENST00000516850 104 ntBASIC2.82□□□□□ -1.96
CDH1P12830 SNORA25.17-201ENST00000517184 124 ntBASIC2.82□□□□□ -1.96
CDH1P12830 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH1P12830 AP000889.2-201ENST00000532684 490 ntBASIC2.82□□□□□ -1.96
CDH1P12830 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.82□□□□□ -1.96
CDH1P12830 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.82□□□□□ -1.96
CDH1P12830 MIR3941-201ENST00000582572 103 ntBASIC2.82□□□□□ -1.96
CDH1P12830 MIR5692C1-201ENST00000585309 91 ntBASIC2.82□□□□□ -1.96
CDH1P12830 BNIP3P22-201ENST00000593399 556 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms