Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL6A2P12110 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL6A2P12110 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
COL6A2P12110 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL6A2P12110 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.85□□□□□ -1.79
COL6A2P12110 RNU6-227P-201ENST00000362865 103 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 RNU6-428P-201ENST00000362942 107 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 RNU6-238P-201ENST00000363313 106 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 RNU6-784P-201ENST00000384330 106 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 Y_RNA.526-201ENST00000384572 110 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 MIR325-201ENST00000385260 98 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.85□□□□□ -1.79
COL6A2P12110 MIR1193-201ENST00000408109 78 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL6A2P12110 CBX3P6-201ENST00000430257 527 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 AL512844.2-201ENST00000433990 593 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.85□□□□□ -1.79
COL6A2P12110 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.85□□□□□ -1.79
COL6A2P12110 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.85□□□□□ -1.79
COL6A2P12110 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.85□□□□□ -1.79
COL6A2P12110 RN7SKP21-201ENST00000516503 220 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 AC131281.1-201ENST00000522984 164 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 IGKV2D-19-201ENST00000523346 262 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 CASP1P1-201ENST00000526345 212 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 AC040926.1-201ENST00000530195 238 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.85□□□□□ -1.79
COL6A2P12110 MIR3186-201ENST00000577404 85 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 AC100812.1-201ENST00000607622 580 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 AC107871.2-201ENST00000612894 502 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 HMGB1P24-202ENST00000615653 685 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 MIR8058-201ENST00000615737 89 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.85□□□□□ -1.79
COL6A2P12110 U6.99-201ENST00000637524 83 ntBASIC3.85□□□□□ -1.79
COL6A2P12110 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.85□□□□□ -1.79
COL6A2P12110 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.84□□□□□ -1.79
COL6A2P12110 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL6A2P12110 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL6A2P12110 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
COL6A2P12110 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL6A2P12110 RNA5SP295-201ENST00000362655 121 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 RNU6-78P-201ENST00000362897 107 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 Y_RNA.551-201ENST00000384661 102 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 RNU6-700P-201ENST00000391043 107 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 U3.37-201ENST00000408528 213 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 RNA5SP129-201ENST00000410276 118 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 AC007098.1-201ENST00000420122 367 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 AC004975.1-201ENST00000428733 208 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.84□□□□□ -1.79
COL6A2P12110 HMGB3P8-201ENST00000449709 577 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 AC079354.2-201ENST00000453523 154 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.84□□□□□ -1.79
COL6A2P12110 AL049830.2-201ENST00000480072 201 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 RPL22P13-201ENST00000493291 347 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.84□□□□□ -1.79
COL6A2P12110 RNU6-1183P-201ENST00000517054 60 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 RNA5SP179-201ENST00000517284 121 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 LINC00933-203ENST00000559812 219 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 MYL12BP1-201ENST00000569826 507 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.84□□□□□ -1.79
COL6A2P12110 AL137849.1-201ENST00000604767 169 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 AC091167.4-201ENST00000605079 184 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 BRDTP1-201ENST00000605735 677 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.84□□□□□ -1.79
COL6A2P12110 MIR6716-201ENST00000613413 80 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL6A2P12110 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.84□□□□□ -1.79
COL6A2P12110 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.84□□□□□ -1.79
COL6A2P12110 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.84□□□□□ -1.79
COL6A2P12110 AC093908.1-201ENST00000623125 8092 ntBASIC3.84□□□□□ -1.79
COL6A2P12110 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
COL6A2P12110 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.84□□□□□ -1.8
COL6A2P12110 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.84□□□□□ -1.8
COL6A2P12110 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL6A2P12110 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.84□□□□□ -1.8
COL6A2P12110 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
COL6A2P12110 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL6A2P12110 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.83□□□□□ -1.8
COL6A2P12110 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL6A2P12110 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
COL6A2P12110 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL6A2P12110 RNU6-778P-201ENST00000363269 103 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 U3.6-201ENST00000363622 211 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 Y_RNA.188-201ENST00000363952 111 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 RNU6-336P-201ENST00000364891 107 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 Z98749.2-208ENST00000381646 500 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 RNU6-26P-201ENST00000383985 107 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 RNU6-907P-201ENST00000390924 102 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 SAR1AP2-201ENST00000392696 594 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 MTCYBP2-201ENST00000407745 171 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 MTCO3P19-201ENST00000415864 321 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL6A2P12110 OSTCP8-201ENST00000445117 448 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 NUTF2P3-201ENST00000448540 384 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 NUTF2P7-201ENST00000453086 375 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 snoU109.2-201ENST00000459316 135 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 TRBV12-2-201ENST00000489763 344 ntBASIC3.83□□□□□ -1.8
COL6A2P12110 Y_RNA.668-201ENST00000516233 93 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms