Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SNORD37.1-201ENST00000390968 65 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 SNORD70.1-201ENST00000391007 85 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 RPS4XP7-201ENST00000406274 780 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AL606923.1-201ENST00000406616 190 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 RNU6-607P-201ENST00000411283 108 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AC011005.2-201ENST00000487324 359 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AC114781.4-201ENST00000513707 639 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 RNA5SP76-201ENST00000516277 87 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AL137161.1-201ENST00000532231 390 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AL512360.1-201ENST00000555346 234 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 EIF1P4-201ENST00000572664 335 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AC078899.3-201ENST00000599065 212 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 BNIP3P30-201ENST00000601184 574 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 NRBF2P5-201ENST00000603087 788 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AC093788.1-201ENST00000609356 927 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 RMST_4.1-201ENST00000616886 107 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 AC010338.1-201ENST00000621823 717 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 CR381653.2-201ENST00000624041 768 ntBASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RAB40ALP0C0E4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 Y_RNA.3-201ENST00000362331 103 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 RNU6-858P-201ENST00000362436 107 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 RNU1-35P-201ENST00000362782 153 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 SNORA69-201ENST00000383895 132 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 RNU6-748P-201ENST00000384648 107 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 MIR196B-201ENST00000384852 84 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 RPS29P6-201ENST00000438196 145 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 PRPS1P1-201ENST00000445305 876 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 UBBP3-201ENST00000445497 241 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 RNU6-261P-201ENST00000459506 102 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 RN7SL499P-201ENST00000481141 276 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 MTAPP1-201ENST00000489154 819 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AC019235.1-201ENST00000503847 207 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AC010486.1-201ENST00000511793 424 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 SNORA31.6-201ENST00000516241 130 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 Y_RNA.687-201ENST00000516558 91 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 Y_RNA.693-201ENST00000516641 110 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AP004607.1-201ENST00000524456 203 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 COX6CP5-201ENST00000527162 228 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AC103810.1-201ENST00000579873 453 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 OR1M4P-201ENST00000589199 287 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AC090115.4-201ENST00000609970 188 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AL020991.1-201ENST00000612314 373 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 AL031601.2-202ENST00000622650 282 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 SCARNA4-202ENST00000625402 129 ntBASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40ALP0C0E4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AL590004.2-201ENST00000404787 371 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 FTH1P15-201ENST00000406984 280 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 RNA5SP492-201ENST00000411330 114 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 MTND3P21-201ENST00000433774 331 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 RPS15AP7-201ENST00000439294 405 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 RPS27AP9-201ENST00000477681 438 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 RPL23AP70-201ENST00000483361 460 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 MRPL42P6-201ENST00000486397 371 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 RNU2-69P-201ENST00000516061 100 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC016957.1-201ENST00000534895 309 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AL512310.1-201ENST00000548639 172 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms