Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MIR196B-201ENST00000384852 84 ntBASIC3.12□□□□□ -1.91
MMP3P08254 RNU6-1009P-201ENST00000390996 107 ntBASIC3.12□□□□□ -1.91
MMP3P08254 AL139095.1-201ENST00000404326 391 ntBASIC3.12□□□□□ -1.91
MMP3P08254 RNA5SP21-201ENST00000410917 96 ntBASIC3.12□□□□□ -1.91
MMP3P08254 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.12□□□□□ -1.91
MMP3P08254 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.12□□□□□ -1.91
MMP3P08254 RPL31P12-201ENST00000422587 358 ntBASIC3.12□□□□□ -1.91
MMP3P08254 ARL5AP4-201ENST00000430731 512 ntBASIC3.12□□□□□ -1.91
MMP3P08254 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.12□□□□□ -1.91
MMP3P08254 MRPL50P4-201ENST00000446432 475 ntBASIC3.12□□□□□ -1.91
MMP3P08254 SSXP4-201ENST00000451349 245 ntBASIC3.12□□□□□ -1.91
MMP3P08254 RNU7-66P-201ENST00000459469 62 ntBASIC3.12□□□□□ -1.91
MMP3P08254 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
MMP3P08254 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
MMP3P08254 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.12□□□□□ -1.91
MMP3P08254 AC022493.1-201ENST00000492984 337 ntBASIC3.12□□□□□ -1.91
MMP3P08254 RPL30P5-201ENST00000494923 336 ntBASIC3.12□□□□□ -1.91
MMP3P08254 FAM206BP-201ENST00000510179 541 ntBASIC3.12□□□□□ -1.91
MMP3P08254 RNU7-30P-201ENST00000516835 62 ntBASIC3.12□□□□□ -1.91
MMP3P08254 RNU6-928P-201ENST00000516876 104 ntBASIC3.12□□□□□ -1.91
MMP3P08254 PSMA3P-201ENST00000555485 635 ntBASIC3.12□□□□□ -1.91
MMP3P08254 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.12□□□□□ -1.91
MMP3P08254 AC026464.5-201ENST00000562497 722 ntBASIC3.12□□□□□ -1.91
MMP3P08254 MIR4742-201ENST00000581069 85 ntBASIC3.12□□□□□ -1.91
MMP3P08254 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.12□□□□□ -1.91
MMP3P08254 Z82243.1-201ENST00000609432 473 ntBASIC3.12□□□□□ -1.91
MMP3P08254 AC027309.3-201ENST00000623419 351 ntBASIC3.12□□□□□ -1.91
MMP3P08254 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.12□□□□□ -1.91
MMP3P08254 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MMP3P08254 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.12□□□□□ -1.91
MMP3P08254 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.12□□□□□ -1.91
MMP3P08254 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
MMP3P08254 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.11□□□□□ -1.91
MMP3P08254 Y_RNA.184-201ENST00000363884 108 ntBASIC3.11□□□□□ -1.91
MMP3P08254 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.11□□□□□ -1.91
MMP3P08254 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
MMP3P08254 RN7SKP58-201ENST00000411010 305 ntBASIC3.11□□□□□ -1.91
MMP3P08254 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MMP3P08254 AC012498.1-201ENST00000424037 437 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.11□□□□□ -1.91
MMP3P08254 EEF1B2P7-201ENST00000451177 676 ntBASIC3.11□□□□□ -1.91
MMP3P08254 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AC117503.1-201ENST00000472241 394 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.11□□□□□ -1.91
MMP3P08254 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
MMP3P08254 AC103851.1-201ENST00000506833 274 ntBASIC3.11□□□□□ -1.91
MMP3P08254 RNU1-61P-201ENST00000516107 151 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AC087241.2-201ENST00000535801 324 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AC090115.3-201ENST00000553218 849 ntBASIC3.11□□□□□ -1.91
MMP3P08254 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.11□□□□□ -1.91
MMP3P08254 HMGB1P14-201ENST00000557424 591 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.11□□□□□ -1.91
MMP3P08254 MIR3942-201ENST00000585264 109 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AC002044.1-201ENST00000606707 158 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.11□□□□□ -1.91
MMP3P08254 AC104985.2-201ENST00000620598 500 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AC022418.1-201ENST00000624118 445 ntBASIC3.11□□□□□ -1.91
MMP3P08254 AL133216.2-202ENST00000634512 349 ntBASIC3.11□□□□□ -1.91
MMP3P08254 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MMP3P08254 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.11□□□□□ -1.91
MMP3P08254 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.11□□□□□ -1.91
MMP3P08254 AL049641.1-201ENST00000441055 1948 ntBASIC3.11□□□□□ -1.91
MMP3P08254 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.1□□□□□ -1.91
MMP3P08254 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
MMP3P08254 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MMP3P08254 Y_RNA.33-201ENST00000362591 102 ntBASIC3.1□□□□□ -1.91
MMP3P08254 U3.12-201ENST00000364498 214 ntBASIC3.1□□□□□ -1.91
MMP3P08254 Y_RNA.356-201ENST00000365475 113 ntBASIC3.1□□□□□ -1.91
MMP3P08254 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MMP3P08254 RNU6-434P-201ENST00000384376 107 ntBASIC3.1□□□□□ -1.91
MMP3P08254 RNU6-140P-201ENST00000384566 108 ntBASIC3.1□□□□□ -1.91
MMP3P08254 MIR301A-201ENST00000385261 86 ntBASIC3.1□□□□□ -1.91
MMP3P08254 AL356432.1-201ENST00000405809 419 ntBASIC3.1□□□□□ -1.91
MMP3P08254 RNA5SP508-201ENST00000411327 119 ntBASIC3.1□□□□□ -1.91
MMP3P08254 IFNA20P-201ENST00000436840 528 ntBASIC3.1□□□□□ -1.91
MMP3P08254 AC091179.1-201ENST00000461606 579 ntBASIC3.1□□□□□ -1.91
MMP3P08254 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.1□□□□□ -1.91
MMP3P08254 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.1□□□□□ -1.91
MMP3P08254 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.1□□□□□ -1.91
MMP3P08254 RNU1-86P-201ENST00000516108 154 ntBASIC3.1□□□□□ -1.91
MMP3P08254 RNU1-107P-201ENST00000516617 154 ntBASIC3.1□□□□□ -1.91
MMP3P08254 AC009902.1-201ENST00000519351 183 ntBASIC3.1□□□□□ -1.91
MMP3P08254 AC022690.1-201ENST00000526681 550 ntBASIC3.1□□□□□ -1.91
MMP3P08254 RAB11AP2-201ENST00000545905 639 ntBASIC3.1□□□□□ -1.91
MMP3P08254 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.1□□□□□ -1.91
MMP3P08254 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.1□□□□□ -1.91
MMP3P08254 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MMP3P08254 AC069234.5-201ENST00000611056 416 ntBASIC3.1□□□□□ -1.91
MMP3P08254 AC006111.3-201ENST00000622137 383 ntBASIC3.1□□□□□ -1.91
MMP3P08254 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.1□□□□□ -1.91
MMP3P08254 AC112487.2-201ENST00000637950 304 ntBASIC3.1□□□□□ -1.91
MMP3P08254 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
MMP3P08254 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MMP3P08254 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
MMP3P08254 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
MMP3P08254 RNU1-35P-201ENST00000362782 153 ntBASIC3.09□□□□□ -1.91
MMP3P08254 Y_RNA.142-201ENST00000363491 102 ntBASIC3.09□□□□□ -1.91
MMP3P08254 MIR512-1-201ENST00000384913 84 ntBASIC3.09□□□□□ -1.91
MMP3P08254 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MMP3P08254 ARL5AP1-201ENST00000418991 388 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms