Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 HMGN2P5-201ENST00000436882 273 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 MTND2P29-201ENST00000438595 412 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AL606517.1-201ENST00000446914 387 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.74□□□□□ -2.13
ERCC1P07992 RN7SL274P-201ENST00000492268 272 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 HMGB1P30-201ENST00000492455 606 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AC119751.4-201ENST00000507498 357 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AC107934.1-201ENST00000522215 217 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AP005639.2-201ENST00000527592 928 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 CYCSP27-201ENST00000527643 293 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AP000763.2-201ENST00000540641 163 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 MIR4524B-201ENST00000581569 115 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AP001004.1-201ENST00000582468 324 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AL078605.1-201ENST00000603529 500 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AL022154.1-201ENST00000604698 785 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AL139022.2-201ENST00000606934 443 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AC126118.1-201ENST00000607744 628 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AC024940.5-201ENST00000622889 474 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.74□□□□□ -2.13
ERCC1P07992 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
ERCC1P07992 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ERCC1P07992 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
ERCC1P07992 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ERCC1P07992 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
ERCC1P07992 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ERCC1P07992 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
ERCC1P07992 MIR412-201ENST00000362142 91 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 Y_RNA.18-201ENST00000362461 102 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 RNU6-942P-201ENST00000363002 107 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 SNORA67.3-201ENST00000384366 140 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 SNORA8-201ENST00000384574 139 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 MIR29C-201ENST00000385231 88 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 UBE2V1P10-201ENST00000414685 269 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 AL445685.2-201ENST00000422551 342 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.73□□□□□ -2.13
ERCC1P07992 AL022400.1-201ENST00000423946 935 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 AC027124.2-201ENST00000428249 105 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 MTND1P20-201ENST00000430341 950 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 RPL23AP30-201ENST00000432419 501 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.73□□□□□ -2.13
ERCC1P07992 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.73□□□□□ -2.13
ERCC1P07992 USP9YP8-201ENST00000441913 500 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.73□□□□□ -2.13
ERCC1P07992 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ERCC1P07992 SSXP1-201ENST00000453640 473 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.73□□□□□ -2.13
ERCC1P07992 AC007182.2-201ENST00000489251 402 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.73□□□□□ -2.13
ERCC1P07992 AC108210.2-201ENST00000503681 201 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 UBE2V1P12-201ENST00000503954 474 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 RNU6-548P-201ENST00000517083 115 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 AP004607.1-201ENST00000524456 203 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 CR383656.8-201ENST00000549046 145 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.73□□□□□ -2.13
ERCC1P07992 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.73□□□□□ -2.13
ERCC1P07992 AC105148.1-201ENST00000604961 409 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.73□□□□□ -2.13
ERCC1P07992 AC108479.2-201ENST00000617314 601 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 AL607023.1-201ENST00000620045 248 ntBASIC1.73□□□□□ -2.13
ERCC1P07992 AL445523.1-201ENST00000451184 1362 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.72□□□□□ -2.13
ERCC1P07992 RNU6-529P-201ENST00000363383 104 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ERCC1P07992 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.72□□□□□ -2.13
ERCC1P07992 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 AL627311.1-201ENST00000431514 115 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 RPL22P17-201ENST00000438729 315 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.72□□□□□ -2.13
ERCC1P07992 MTND1P12-201ENST00000455231 147 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 snoU13.23-201ENST00000458863 104 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 HMGB3P17-201ENST00000504195 649 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 HSPE1P23-201ENST00000509838 286 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ERCC1P07992 AC116347.2-201ENST00000514912 523 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 AC022616.6-201ENST00000520479 119 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 AP003122.4-201ENST00000530980 758 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.72□□□□□ -2.13
ERCC1P07992 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.72□□□□□ -2.13
ERCC1P07992 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
ERCC1P07992 AL359314.1-201ENST00000616913 261 ntBASIC1.72□□□□□ -2.13
ERCC1P07992 ZNF876P-202ENST00000398732 1485 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 Y_RNA.97-201ENST00000363094 102 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 RNU6-611P-201ENST00000384276 104 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 RNU6-72P-201ENST00000384285 79 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 RNA5SP465-201ENST00000391195 109 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 RNA5SP212-201ENST00000391223 107 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 RNU2-48P-201ENST00000410694 191 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.71□□□□□ -2.14
ERCC1P07992 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.71□□□□□ -2.14
ERCC1P07992 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.71□□□□□ -2.14
ERCC1P07992 RPL37P21-201ENST00000435890 276 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.71□□□□□ -2.14
ERCC1P07992 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.71□□□□□ -2.14
ERCC1P07992 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.71□□□□□ -2.14
ERCC1P07992 AC245102.2-201ENST00000448956 180 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 NDUFB1P2-201ENST00000449477 176 ntBASIC1.71□□□□□ -2.14
ERCC1P07992 AC091951.3-201ENST00000504093 246 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms