Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.32□□□□□ -2.2
APOEP02649 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.32□□□□□ -2.2
APOEP02649 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.32□□□□□ -2.2
APOEP02649 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.32□□□□□ -2.2
APOEP02649 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.32□□□□□ -2.2
APOEP02649 AC126365.2-201ENST00000580630 379 ntBASIC1.32□□□□□ -2.2
APOEP02649 AC099785.1-201ENST00000605697 437 ntBASIC1.32□□□□□ -2.2
APOEP02649 AC090186.1-201ENST00000605991 572 ntBASIC1.32□□□□□ -2.2
APOEP02649 AC091965.5-201ENST00000624785 342 ntBASIC1.32□□□□□ -2.2
APOEP02649 SNORD114-19-201ENST00000363072 75 ntBASIC1.31□□□□□ -2.2
APOEP02649 AP000949.1-201ENST00000438328 629 ntBASIC1.31□□□□□ -2.2
APOEP02649 RPL36AP21-201ENST00000490372 323 ntBASIC1.31□□□□□ -2.2
APOEP02649 RNU2-53P-201ENST00000516257 147 ntBASIC1.31□□□□□ -2.2
APOEP02649 RNU6-64P-201ENST00000517119 105 ntBASIC1.31□□□□□ -2.2
APOEP02649 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.31□□□□□ -2.2
APOEP02649 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.31□□□□□ -2.2
APOEP02649 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.31□□□□□ -2.2
APOEP02649 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.31□□□□□ -2.2
APOEP02649 AL359821.1-201ENST00000605519 182 ntBASIC1.31□□□□□ -2.2
APOEP02649 AP002802.2-201ENST00000605877 235 ntBASIC1.31□□□□□ -2.2
APOEP02649 AC093788.1-201ENST00000609356 927 ntBASIC1.31□□□□□ -2.2
APOEP02649 Z82243.1-201ENST00000609432 473 ntBASIC1.31□□□□□ -2.2
APOEP02649 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
APOEP02649 AC090970.3-201ENST00000612566 866 ntBASIC1.31□□□□□ -2.2
APOEP02649 AL132822.1-201ENST00000617063 513 ntBASIC1.31□□□□□ -2.2
APOEP02649 AL136313.1-201ENST00000624804 202 ntBASIC1.31□□□□□ -2.2
APOEP02649 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOEP02649 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
APOEP02649 RNU6-1274P-201ENST00000384557 107 ntBASIC1.3□□□□□ -2.2
APOEP02649 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.3□□□□□ -2.2
APOEP02649 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.3□□□□□ -2.2
APOEP02649 AL953862.1-201ENST00000423016 168 ntBASIC1.3□□□□□ -2.2
APOEP02649 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.3□□□□□ -2.2
APOEP02649 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
APOEP02649 EEF1E1P1-201ENST00000446998 430 ntBASIC1.3□□□□□ -2.2
APOEP02649 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.3□□□□□ -2.2
APOEP02649 PTP4A1P4-201ENST00000512479 322 ntBASIC1.3□□□□□ -2.2
APOEP02649 RNU6-1053P-201ENST00000515930 101 ntBASIC1.3□□□□□ -2.2
APOEP02649 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.3□□□□□ -2.2
APOEP02649 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.3□□□□□ -2.2
APOEP02649 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
APOEP02649 AC005832.3-201ENST00000537929 631 ntBASIC1.3□□□□□ -2.2
APOEP02649 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.3□□□□□ -2.2
APOEP02649 MIR4293-201ENST00000584305 78 ntBASIC1.3□□□□□ -2.2
APOEP02649 BNIP3P27-201ENST00000599991 412 ntBASIC1.3□□□□□ -2.2
APOEP02649 AC073410.2-201ENST00000603240 332 ntBASIC1.3□□□□□ -2.2
APOEP02649 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
APOEP02649 AC098614.4-201ENST00000607601 462 ntBASIC1.3□□□□□ -2.2
APOEP02649 AP003476.1-201ENST00000623984 516 ntBASIC1.3□□□□□ -2.2
APOEP02649 AC090517.3-201ENST00000625170 141 ntBASIC1.3□□□□□ -2.2
APOEP02649 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.3□□□□□ -2.2
APOEP02649 RNU1-58P-201ENST00000362413 163 ntBASIC1.29□□□□□ -2.2
APOEP02649 Y_RNA.327-201ENST00000365201 102 ntBASIC1.29□□□□□ -2.2
APOEP02649 RNU6-611P-201ENST00000384276 104 ntBASIC1.29□□□□□ -2.2
APOEP02649 RNU2-41P-201ENST00000410991 178 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC138623.1-201ENST00000418060 216 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.29□□□□□ -2.2
APOEP02649 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.29□□□□□ -2.2
APOEP02649 RPS6P15-201ENST00000431996 751 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.29□□□□□ -2.2
APOEP02649 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.29□□□□□ -2.2
APOEP02649 RNU7-59P-201ENST00000459101 61 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.29□□□□□ -2.2
APOEP02649 AP006587.4-201ENST00000526053 529 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.29□□□□□ -2.2
APOEP02649 AC084364.2-201ENST00000546924 395 ntBASIC1.29□□□□□ -2.2
APOEP02649 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.29□□□□□ -2.2
APOEP02649 AL670379.6-201ENST00000603753 252 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL670379.11-201ENST00000604059 253 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC073413.2-201ENST00000604332 360 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC010900.2-201ENST00000604508 210 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC008162.1-201ENST00000604718 254 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL670379.1-201ENST00000604752 252 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL670379.2-201ENST00000604983 252 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL670379.5-201ENST00000605253 252 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL670379.4-201ENST00000605279 254 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL670379.12-201ENST00000605291 253 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL670379.8-201ENST00000605353 252 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL670379.7-201ENST00000605823 252 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC096772.1-201ENST00000609146 564 ntBASIC1.29□□□□□ -2.2
APOEP02649 AL158163.2-201ENST00000619110 700 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC099842.1-201ENST00000619919 596 ntBASIC1.29□□□□□ -2.2
APOEP02649 AC009269.6-201ENST00000621778 588 ntBASIC1.29□□□□□ -2.2
APOEP02649 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
APOEP02649 AC091812.1-201ENST00000432235 1948 ntBASIC1.28□□□□□ -2.2
APOEP02649 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
APOEP02649 RNU6-288P-201ENST00000363690 104 ntBASIC1.28□□□□□ -2.2
APOEP02649 RNU6-546P-201ENST00000383991 107 ntBASIC1.28□□□□□ -2.2
APOEP02649 MIR186-201ENST00000384988 86 ntBASIC1.28□□□□□ -2.2
APOEP02649 Y_RNA.578-201ENST00000390903 88 ntBASIC1.28□□□□□ -2.2
APOEP02649 RNA5SP100-201ENST00000410903 110 ntBASIC1.28□□□□□ -2.2
APOEP02649 RNA5SP59-201ENST00000410922 110 ntBASIC1.28□□□□□ -2.2
APOEP02649 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.28□□□□□ -2.2
APOEP02649 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.28□□□□□ -2.2
APOEP02649 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.28□□□□□ -2.2
APOEP02649 AC245102.2-201ENST00000448956 180 ntBASIC1.28□□□□□ -2.2
APOEP02649 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.28□□□□□ -2.2
APOEP02649 RPS3AP22-201ENST00000488297 769 ntBASIC1.28□□□□□ -2.2
APOEP02649 AC109927.2-201ENST00000506416 303 ntBASIC1.28□□□□□ -2.2
APOEP02649 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms