Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MRPL42P4-201ENST00000453267 443 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 KATNBL1P6-201ENST00000453433 915 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AL441985.1-201ENST00000457727 251 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AC026410.2-201ENST00000460281 156 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 RNU6-1261P-201ENST00000517194 104 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 NRON-201ENST00000517270 370 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AC034114.1-201ENST00000520293 285 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 MIR4637-201ENST00000582405 84 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AP005229.2-201ENST00000609980 697 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AL627230.5-201ENST00000619807 58 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AC002550.2-201ENST00000621246 394 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 MTND4P12-201ENST00000498999 1377 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
COL1A1P02452 MTND4P21-201ENST00000453886 1357 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 RNU6-28P-201ENST00000362378 107 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 RNU6-778P-201ENST00000363269 103 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 RNU6-792P-201ENST00000363490 107 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 RNU6-338P-201ENST00000383888 105 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
COL1A1P02452 CCNG1P1-201ENST00000406783 885 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 USP9YP33-201ENST00000412220 421 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.99□□□□□ -2.25
COL1A1P02452 MTCYBP15-201ENST00000433123 1127 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 NANOGP2-201ENST00000435391 727 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 USP9YP35-201ENST00000435696 412 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AL161651.1-201ENST00000440882 223 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.99□□□□□ -2.25
COL1A1P02452 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.99□□□□□ -2.25
COL1A1P02452 SMURF2P1-201ENST00000514992 481 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 RNA5SP165-201ENST00000517142 115 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AP001189.2-201ENST00000527320 189 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.99□□□□□ -2.25
COL1A1P02452 LINC00557-201ENST00000563184 1279 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AC090079.2-201ENST00000575289 768 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AC100814.1-201ENST00000606963 623 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
COL1A1P02452 AC011939.3-201ENST00000613686 466 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AL118508.4-201ENST00000624142 1176 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 U2.21-201ENST00000637295 81 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 OR5T3-201ENST00000303059 1023 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 SNRPEP3-201ENST00000338402 276 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 MIR26B-201ENST00000362251 77 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 RNU5E-8P-201ENST00000363502 116 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.98□□□□□ -2.25
COL1A1P02452 UBE2V1P4-201ENST00000425374 344 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 SKA2P1-201ENST00000425592 390 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.98□□□□□ -2.25
COL1A1P02452 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.98□□□□□ -2.25
COL1A1P02452 LRRC34P2-201ENST00000514850 553 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.98□□□□□ -2.25
COL1A1P02452 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.98□□□□□ -2.25
COL1A1P02452 ZNF971P-201ENST00000562068 1249 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 AC090330.1-201ENST00000588646 764 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 AC002545.1-201ENST00000592511 181 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 AL512605.2-201ENST00000592972 256 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 AC005332.6-201ENST00000613178 446 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 AL359314.1-201ENST00000616913 261 ntBASIC0.98□□□□□ -2.25
COL1A1P02452 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.98□□□□□ -2.25
COL1A1P02452 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.98□□□□□ -2.25
COL1A1P02452 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 Y_RNA.67-201ENST00000362870 100 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 RNU6-216P-201ENST00000363282 104 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 RNU6-1078P-201ENST00000364522 103 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 SNORD26-201ENST00000384147 75 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 Y_RNA.471-201ENST00000384312 102 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 MIR29C-201ENST00000385231 88 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AC009310.1-201ENST00000414414 451 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 MRPL35P3-201ENST00000421557 364 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 C1DP1-201ENST00000426049 402 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.97□□□□□ -2.25
COL1A1P02452 AL590365.1-201ENST00000450788 243 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AP001324.2-201ENST00000461163 319 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AC008379.1-201ENST00000463655 464 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AC005908.1-201ENST00000468701 347 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.97□□□□□ -2.25
COL1A1P02452 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.97□□□□□ -2.25
COL1A1P02452 RNU6-840P-201ENST00000517275 65 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AC023632.1-201ENST00000518463 375 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.97□□□□□ -2.25
COL1A1P02452 AC125611.1-201ENST00000549563 229 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 MTATP6P25-201ENST00000574491 261 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AC004805.2-201ENST00000605382 482 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AF129408.1-201ENST00000608767 431 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AL603758.1-201ENST00000618654 241 ntBASIC0.97□□□□□ -2.25
COL1A1P02452 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.97□□□□□ -2.25
COL1A1P02452 AC008163.1-202ENST00000636004 2889 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 MIR424-201ENST00000362227 98 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 RNU6-637P-201ENST00000384050 107 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 RNU6-939P-201ENST00000384634 107 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 RNU6-754P-201ENST00000391166 107 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 MIR1197-201ENST00000408818 88 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 RNA5SP193-201ENST00000410353 107 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 UBE2FP1-201ENST00000416536 447 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.96□□□□□ -2.26
COL1A1P02452 SEPT7P5-201ENST00000434048 306 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 USP9YP24-201ENST00000434374 697 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms