Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SNORD14A-201ENST00000606526 91 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AL031601.2-202ENST00000622650 282 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AL359740.1-201ENST00000624340 592 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 SNORD14B-201ENST00000364533 90 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 Y_RNA.576-201ENST00000384781 102 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 MIR10A-201ENST00000385043 110 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 RNU6-1140P-201ENST00000410517 106 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 EEF1A1P40-201ENST00000412883 573 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AL356379.1-201ENST00000414105 126 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 RPL21P90-201ENST00000415692 466 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 BX295541.1-201ENST00000417774 250 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 PGBD4P6-201ENST00000421501 610 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 RPL31P35-201ENST00000431058 377 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AL627311.1-201ENST00000431514 115 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 RPS6P15-201ENST00000431996 751 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AC000111.3-201ENST00000433478 193 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AL360271.2-201ENST00000447710 161 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 RPS27AP8-201ENST00000452665 445 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 SNRPFP4-201ENST00000456366 242 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 snoU109.1-201ENST00000459339 135 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 SNORD42A-201ENST00000459584 64 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AC068781.1-201ENST00000488231 618 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AC140059.1-201ENST00000489238 361 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AC008526.1-201ENST00000509149 338 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AF213884.2-201ENST00000510417 903 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AC114781.4-201ENST00000513707 639 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 MIR892C-201ENST00000516410 77 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AP001646.1-201ENST00000527936 915 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AC021269.2-201ENST00000532318 330 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AL133241.1-201ENST00000556832 487 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 MTCYBP33-201ENST00000575007 1130 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AL138963.2-201ENST00000605137 226 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AP001506.1-201ENST00000615444 211 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 U6.42-201ENST00000618440 107 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 AC092656.1-203ENST00000624134 423 ntBASIC1.63□□□□□ -2.15
HLA-DQA1P01909 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DQA1P01909 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 RNU6-179P-201ENST00000363350 107 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 SNORA3A-201ENST00000364113 130 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 RNA5SP160-201ENST00000364866 120 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 SNORD115-7-201ENST00000365306 82 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 RNU6-72P-201ENST00000384285 79 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 MIR634-201ENST00000385208 97 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 MIR23A-201ENST00000385245 73 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 UBE2V1P2-201ENST00000397758 440 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AL049545.1-201ENST00000401856 572 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AL353621.1-201ENST00000418219 243 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC092447.3-201ENST00000426027 686 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AL353706.1-201ENST00000436728 494 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AL031667.1-201ENST00000440222 725 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 MTND1P26-201ENST00000440488 538 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 CALM1P1-201ENST00000442082 433 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AL136380.1-201ENST00000447970 162 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 RNA5SP269-201ENST00000459032 137 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC118465.1-201ENST00000513820 1271 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC119751.5-201ENST00000514077 770 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 RNU1-86P-201ENST00000516108 154 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 RNU1-107P-201ENST00000516617 154 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 RNU6-685P-201ENST00000517088 95 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 OR5AQ1P-201ENST00000527596 927 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AL158211.1-201ENST00000566763 763 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 LRRC37A5P-203ENST00000580181 585 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 MIR3682-201ENST00000581338 84 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 MIR5002-201ENST00000584713 97 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms