Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC005951.2-201ENST00000576282 495 ntBASIC3.39□□□□□ -1.87
TOP3BO95985 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.39□□□□□ -1.87
TOP3BO95985 AC006006.1-201ENST00000603082 144 ntBASIC3.39□□□□□ -1.87
TOP3BO95985 ATP1B3P1-201ENST00000605365 821 ntBASIC3.39□□□□□ -1.87
TOP3BO95985 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.39□□□□□ -1.87
TOP3BO95985 AL669831.3-213ENST00000636676 183 ntBASIC3.39□□□□□ -1.87
TOP3BO95985 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
TOP3BO95985 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TOP3BO95985 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.39□□□□□ -1.87
TOP3BO95985 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
TOP3BO95985 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.38□□□□□ -1.87
TOP3BO95985 Y_RNA.5-201ENST00000362334 102 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 RNU6-7-201ENST00000364784 107 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 RNU6-8-201ENST00000365467 107 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 RNU6-1040P-201ENST00000383974 107 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 SNORA44-201ENST00000384584 132 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TOP3BO95985 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
TOP3BO95985 RPS12P24-201ENST00000412619 387 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 RPL7P10-201ENST00000417407 739 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 ATG3P1-201ENST00000419507 911 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.38□□□□□ -1.87
TOP3BO95985 SNAP23P1-201ENST00000433229 246 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 SNRPEP4-201ENST00000435815 279 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AC006028.1-201ENST00000438379 402 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 HMGB1P12-201ENST00000438594 598 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 NEFMP1-201ENST00000443423 1006 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.38□□□□□ -1.87
TOP3BO95985 AL035666.1-201ENST00000446195 348 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.38□□□□□ -1.87
TOP3BO95985 HMGN1P18-201ENST00000457642 277 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.38□□□□□ -1.87
TOP3BO95985 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TOP3BO95985 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.38□□□□□ -1.87
TOP3BO95985 RNU6-123P-201ENST00000516163 102 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 SNORA31.8-201ENST00000516327 108 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AC009902.1-201ENST00000519351 183 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AC104027.1-201ENST00000521887 300 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AP006587.4-201ENST00000526053 529 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 COX6CP5-201ENST00000527162 228 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AC022080.3-201ENST00000544433 482 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.38□□□□□ -1.87
TOP3BO95985 MED28P6-201ENST00000558776 231 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 MIR4680-201ENST00000580906 66 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AL670379.4-201ENST00000605279 254 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AC009570.1-201ENST00000609599 745 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 U2.17-201ENST00000611454 95 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AC083806.3-201ENST00000614016 455 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TOP3BO95985 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TOP3BO95985 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.38□□□□□ -1.87
TOP3BO95985 KPNA2P1-201ENST00000458289 1591 ntBASIC3.38□□□□□ -1.87
TOP3BO95985 SDAD1P2-201ENST00000441308 2028 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
TOP3BO95985 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TOP3BO95985 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.37□□□□□ -1.87
TOP3BO95985 FTLP6-201ENST00000355274 422 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 MIR422A-201ENST00000362286 90 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 RNU6-50P-201ENST00000362356 103 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 RNU6-562P-201ENST00000362731 107 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 RNU6-593P-201ENST00000364716 112 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 Y_RNA.399-201ENST00000383955 105 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 MIR568-201ENST00000385036 95 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 SNORA16.2-201ENST00000390991 127 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 SNORD70.1-201ENST00000391007 85 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AL357075.1-201ENST00000404107 726 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AC126124.2-201ENST00000413542 321 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.37□□□□□ -1.87
TOP3BO95985 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.37□□□□□ -1.87
TOP3BO95985 AC006445.1-201ENST00000491925 405 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.37□□□□□ -1.87
TOP3BO95985 TBCAP3-201ENST00000512475 312 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 RNU6-1016P-201ENST00000516689 94 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AP003122.3-201ENST00000526316 255 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.37□□□□□ -1.87
TOP3BO95985 MIR4503-201ENST00000582187 83 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 MIR5692C1-201ENST00000585309 91 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AL138889.2-201ENST00000603883 242 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AC104763.2-201ENST00000604179 382 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.37□□□□□ -1.87
TOP3BO95985 AC087588.2-201ENST00000617667 426 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AC010378.1-201ENST00000619270 362 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TOP3BO95985 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
TOP3BO95985 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TOP3BO95985 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AC007496.3-201ENST00000624987 3443 ntBASIC3.37□□□□□ -1.87
TOP3BO95985 AL049641.1-201ENST00000441055 1948 ntBASIC3.36□□□□□ -1.87
TOP3BO95985 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TOP3BO95985 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.36□□□□□ -1.87
TOP3BO95985 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
TOP3BO95985 RNU6-331P-201ENST00000384724 107 ntBASIC3.36□□□□□ -1.87
TOP3BO95985 MIR548F4-201ENST00000408515 105 ntBASIC3.36□□□□□ -1.87
TOP3BO95985 RNU6-985P-201ENST00000410182 104 ntBASIC3.36□□□□□ -1.87
TOP3BO95985 RNA5SP129-201ENST00000410276 118 ntBASIC3.36□□□□□ -1.87
TOP3BO95985 AC063979.1-201ENST00000415539 377 ntBASIC3.36□□□□□ -1.87
TOP3BO95985 RPLP0P7-201ENST00000416050 667 ntBASIC3.36□□□□□ -1.87
TOP3BO95985 MCFD2P1-201ENST00000417812 300 ntBASIC3.36□□□□□ -1.87
TOP3BO95985 AC018865.2-201ENST00000423631 129 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms