Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RNU6-1025P-201ENST00000410629 104 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 Y_RNA.608-201ENST00000410647 95 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 HIGD1AP15-201ENST00000416198 280 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.43□□□□□ -2.18
CPSF4O95639 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.43□□□□□ -2.18
CPSF4O95639 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.43□□□□□ -2.18
CPSF4O95639 AC010099.3-201ENST00000423896 409 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.43□□□□□ -2.18
CPSF4O95639 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.43□□□□□ -2.18
CPSF4O95639 EPS15P1-201ENST00000448836 336 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.43□□□□□ -2.18
CPSF4O95639 RPS3AP22-201ENST00000488297 769 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC023194.1-201ENST00000493084 308 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 RNA5SP112-201ENST00000515937 99 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 ACA59.2-201ENST00000517061 156 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC011979.2-201ENST00000527568 352 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AP003122.4-201ENST00000530980 758 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 OR5B19P-201ENST00000531766 928 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 CBX3P7-201ENST00000532876 502 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 CYCSP26-201ENST00000534107 320 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.43□□□□□ -2.18
CPSF4O95639 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.43□□□□□ -2.18
CPSF4O95639 MIR15A-201ENST00000607334 83 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC013412.1-201ENST00000610687 192 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC027807.2-201ENST00000616099 408 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC092140.2-201ENST00000618027 521 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC024581.2-201ENST00000619986 252 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.43□□□□□ -2.18
CPSF4O95639 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.43□□□□□ -2.18
CPSF4O95639 AC103710.2-202ENST00000641454 2853 ntBASIC1.43□□□□□ -2.18
CPSF4O95639 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CPSF4O95639 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 Y_RNA.33-201ENST00000362591 102 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 SNORD56.2-201ENST00000363242 71 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 SNORA75B-201ENST00000384053 137 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 RNU6-166P-201ENST00000384371 107 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CPSF4O95639 AL133475.1-201ENST00000404414 305 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 RNA5SP270-201ENST00000411361 118 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 PGBD4P6-201ENST00000421501 610 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AC003685.2-201ENST00000422795 395 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 AC007283.2-201ENST00000424739 197 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 RPS3AP44-201ENST00000425466 790 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AL513185.2-201ENST00000425543 193 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.42□□□□□ -2.18
CPSF4O95639 RPS15AP9-201ENST00000439856 381 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AL078601.1-201ENST00000444542 271 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 BTF3P15-201ENST00000455606 336 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 RNA5SP233-201ENST00000459153 113 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 RPL23AP42-201ENST00000471152 471 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AC068781.1-201ENST00000488231 618 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 AC010587.1-201ENST00000505809 469 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 SMURF2P1-201ENST00000514992 481 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 MIR892C-201ENST00000516410 77 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 RNU7-51P-201ENST00000516560 62 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 MTND1P24-201ENST00000552175 861 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AL157871.3-201ENST00000557231 293 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AC012213.3-201ENST00000577199 777 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF4O95639 MIR1273C-201ENST00000578669 77 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.42□□□□□ -2.18
CPSF4O95639 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.42□□□□□ -2.18
CPSF4O95639 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.42□□□□□ -2.18
CPSF4O95639 AC174048.1-201ENST00000603389 144 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AP002360.4-201ENST00000606980 481 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AL031775.1-201ENST00000607014 887 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 RNU6-87P-201ENST00000607561 108 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 MIR7844-201ENST00000616161 122 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AL162373.1-201ENST00000620433 407 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AP003400.5-201ENST00000624827 617 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 AC017037.3-201ENST00000625016 472 ntBASIC1.42□□□□□ -2.18
CPSF4O95639 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CPSF4O95639 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CPSF4O95639 Z75746.1-201ENST00000440243 2080 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 RNU6-39P-201ENST00000384344 107 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.41□□□□□ -2.18
CPSF4O95639 CYCSP49-201ENST00000420810 319 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC097463.2-201ENST00000421074 142 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AL589872.1-201ENST00000426602 288 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 RPL23AP30-201ENST00000432419 501 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AC016691.1-201ENST00000441321 413 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.41□□□□□ -2.18
CPSF4O95639 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4O95639 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF4O95639 AMD1P1-201ENST00000457220 922 ntBASIC1.41□□□□□ -2.18
CPSF4O95639 AL441985.1-201ENST00000457727 251 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms