Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC096649.2-201ENST00000416186 393 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 SNRPEP9-201ENST00000436794 238 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 NEFMP1-201ENST00000443423 1006 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 AC007677.1-201ENST00000445757 515 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 RNA5SP269-201ENST00000459032 137 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 SNORD42A-201ENST00000459584 64 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 OR5B19P-201ENST00000531766 928 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 MIR3167-201ENST00000579623 85 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 NRBF2P1-201ENST00000587407 859 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 AC010620.1-201ENST00000601088 1102 ntBASIC1.92□□□□□ -2.1
CTDNEP1O95476 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.92□□□□□ -2.1
CTDNEP1O95476 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CTDNEP1O95476 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CTDNEP1O95476 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CTDNEP1O95476 SNORD56.2-201ENST00000363242 71 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 RNU6-778P-201ENST00000363269 103 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 RNU6-288P-201ENST00000363690 104 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 RNY4P34-201ENST00000364779 95 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 RNU6-169P-201ENST00000365336 107 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 SNORA46.1-201ENST00000391069 153 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 RNU2-49P-201ENST00000410666 184 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 RN7SKP142-201ENST00000411236 328 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC114491.1-201ENST00000416095 246 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 MTCYBP1-201ENST00000454315 1119 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 RPL26P9-201ENST00000457466 433 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.91□□□□□ -2.1
CTDNEP1O95476 SNORD97-201ENST00000459187 142 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC104564.1-201ENST00000493028 407 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC091965.2-201ENST00000512324 613 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 RNA5SP165-201ENST00000517142 115 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
CTDNEP1O95476 AP000873.5-201ENST00000533906 236 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AL359212.1-201ENST00000556608 614 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.91□□□□□ -2.1
CTDNEP1O95476 MIR5571-201ENST00000577998 113 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC024619.4-201ENST00000580924 316 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC005771.1-201ENST00000585581 349 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AL590229.1-201ENST00000603497 542 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AP002360.4-201ENST00000606980 481 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC010678.1-201ENST00000614118 713 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC130324.3-201ENST00000614165 542 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC008250.2-201ENST00000615261 205 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AL158063.1-201ENST00000615349 536 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.91□□□□□ -2.1
CTDNEP1O95476 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AL162373.1-201ENST00000620433 407 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 AC098657.3-201ENST00000620434 263 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 Z69908.1-201ENST00000622603 247 ntBASIC1.91□□□□□ -2.1
CTDNEP1O95476 TEX21P-201ENST00000447107 1476 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 RNU6-960P-201ENST00000364056 120 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 RNA5SP363-201ENST00000365072 115 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 RNU6-946P-201ENST00000383878 107 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 RNU6-348P-201ENST00000384386 107 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 MIR504-201ENST00000385065 83 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC104651.1-201ENST00000427559 735 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AL592045.1-201ENST00000429867 352 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 MICF-203ENST00000432679 129 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC119618.1-201ENST00000434191 222 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.9□□□□□ -2.11
CTDNEP1O95476 USP9YP29-201ENST00000445112 563 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.9□□□□□ -2.11
CTDNEP1O95476 MTCO2P29-201ENST00000465212 189 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 RPS27AP10-201ENST00000496103 208 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC116337.1-201ENST00000509680 687 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC117532.1-201ENST00000514638 323 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 RNU2-10P-201ENST00000516375 211 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 RNU7-193P-201ENST00000516723 65 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC084851.1-201ENST00000529105 249 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AL356057.1-201ENST00000533798 831 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.9□□□□□ -2.11
CTDNEP1O95476 MIR3913-1-201ENST00000577744 102 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC011494.1-201ENST00000596454 237 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC119751.7-201ENST00000600494 245 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AC098614.4-201ENST00000607601 462 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AL365204.3-201ENST00000612448 685 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 AL161423.1-201ENST00000613700 262 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.9□□□□□ -2.11
CTDNEP1O95476 MTND5P42-201ENST00000637720 498 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 ELL2P3-201ENST00000457883 1602 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms