Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.68□□□□□ -1.82
CDKL5O76039 RPL21P41-201ENST00000459863 264 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 AC091153.1-201ENST00000466297 402 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 RN7SL601P-201ENST00000471221 293 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 AL135752.1-201ENST00000479477 471 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 Y_RNA.708-201ENST00000516950 96 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDKL5O76039 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.68□□□□□ -1.82
CDKL5O76039 MIR4444-1-201ENST00000581696 74 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 MIR4444-2-201ENST00000584390 74 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 BDH2P1-201ENST00000602288 736 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 AC083806.3-201ENST00000614016 455 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 AC007485.1-201ENST00000616755 206 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 PISRT1.1-201ENST00000616930 107 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 AC012314.7-201ENST00000619693 93 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 7SK.10-201ENST00000621414 298 ntBASIC3.68□□□□□ -1.82
CDKL5O76039 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CDKL5O76039 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL5O76039 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.67□□□□□ -1.82
CDKL5O76039 RNU6-629P-201ENST00000384061 103 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 AC005326.1-201ENST00000429197 123 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 AC236972.1-201ENST00000433225 199 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 HMGN2P20-201ENST00000437531 273 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 AC009969.1-201ENST00000438726 172 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 RPS4XP13-201ENST00000483219 789 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 AC026801.1-201ENST00000497178 464 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL5O76039 RNU6-914P-201ENST00000516749 109 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 RNU1-54P-201ENST00000517181 120 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 AC026371.1-201ENST00000551867 419 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CDKL5O76039 AC011890.2-201ENST00000613393 294 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 AL132822.1-201ENST00000617063 513 ntBASIC3.67□□□□□ -1.82
CDKL5O76039 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.67□□□□□ -1.82
CDKL5O76039 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL5O76039 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CDKL5O76039 SNORA71.3-201ENST00000362582 128 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 RNU6-1032P-201ENST00000384100 107 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 SNORA75.6-201ENST00000391318 127 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.66□□□□□ -1.82
CDKL5O76039 RPL21P90-201ENST00000415692 466 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.66□□□□□ -1.82
CDKL5O76039 AC005300.1-201ENST00000428401 373 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 YME1L1P1-201ENST00000429435 297 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 AL360271.2-201ENST00000447710 161 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 PRSS3P4-201ENST00000453323 162 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 RN7SL863P-201ENST00000462370 296 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 AC034236.1-201ENST00000469891 373 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 AC108860.1-201ENST00000484521 383 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.66□□□□□ -1.82
CDKL5O76039 AC009902.1-201ENST00000519351 183 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 AC087854.1-201ENST00000519706 414 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.66□□□□□ -1.82
CDKL5O76039 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.66□□□□□ -1.82
CDKL5O76039 SYF2P1-201ENST00000550658 413 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL5O76039 AC084757.4-201ENST00000616350 526 ntBASIC3.66□□□□□ -1.82
CDKL5O76039 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL5O76039 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CDKL5O76039 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDKL5O76039 AF117829.1-206ENST00000621883 3802 ntBASIC3.65□□□□□ -1.82
CDKL5O76039 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDKL5O76039 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDKL5O76039 U3.6-201ENST00000363622 211 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 RNA5SP267-201ENST00000364893 126 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AC117470.1-201ENST00000381974 330 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 Y_RNA.534-201ENST00000384599 112 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 MIR578-201ENST00000384828 96 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 MRPL42P3-201ENST00000401492 326 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 RNU6-985P-201ENST00000410182 104 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AL158156.1-201ENST00000422509 473 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL5O76039 AL451062.2-201ENST00000427515 271 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 HMGB1P27-201ENST00000431429 603 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 HMGB1P12-201ENST00000438594 598 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL5O76039 Z75741.1-201ENST00000446793 314 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 RPL31P13-201ENST00000484151 370 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 MTND3P25-201ENST00000509243 135 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AC096745.1-201ENST00000509945 370 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AC092436.3-201ENST00000511788 257 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 RNU6-120P-201ENST00000516077 103 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AC068657.1-201ENST00000520807 306 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.65□□□□□ -1.83
CDKL5O76039 SNRPGP16-201ENST00000533275 226 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL5O76039 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.65□□□□□ -1.83
CDKL5O76039 AL117187.1-201ENST00000555482 181 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 MIR4474-201ENST00000579189 78 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 BNIP3P16-201ENST00000589779 534 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AC005014.2-201ENST00000607795 599 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AC004832.5-201ENST00000608677 401 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 AL161423.1-201ENST00000613700 262 ntBASIC3.65□□□□□ -1.83
CDKL5O76039 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL5O76039 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL5O76039 ZNF807-201ENST00000328088 1707 ntBASIC3.64□□□□□ -1.83
CDKL5O76039 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CDKL5O76039 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms