Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 U4.1-201ENST00000620349 87 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.31□□□□□ -1.72
VAMP4O75379 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VAMP4O75379 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VAMP4O75379 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VAMP4O75379 RNU1-70P-201ENST00000362618 164 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 Y_RNA.176-201ENST00000363815 109 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 RNA5SP267-201ENST00000364893 126 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 SNORD73A-201ENST00000386062 65 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AL445529.1-201ENST00000398713 389 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AL158156.1-201ENST00000422509 473 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.3□□□□□ -1.72
VAMP4O75379 AL133396.1-201ENST00000432048 687 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 DAP3P1-201ENST00000441522 278 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 RPL21P10-201ENST00000463521 490 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 MTATP8P1-201ENST00000467115 207 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AC010285.1-201ENST00000470580 392 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AC011005.2-201ENST00000487324 359 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 RPL7P47-201ENST00000497299 556 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.3□□□□□ -1.72
VAMP4O75379 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.3□□□□□ -1.72
VAMP4O75379 AC104576.1-201ENST00000524225 88 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 VN1R107P-201ENST00000601784 209 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AC092447.9-201ENST00000603395 144 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AL355810.1-201ENST00000614629 552 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AC012314.7-201ENST00000619693 93 ntBASIC4.3□□□□□ -1.72
VAMP4O75379 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.3□□□□□ -1.72
VAMP4O75379 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.3□□□□□ -1.72
VAMP4O75379 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VAMP4O75379 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VAMP4O75379 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VAMP4O75379 Y_RNA.193-201ENST00000363979 102 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 MIR1290-201ENST00000408735 78 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC096664.2-201ENST00000411843 406 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC126124.2-201ENST00000413542 321 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 Z85995.1-201ENST00000415547 335 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AL356968.1-201ENST00000416622 474 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AL096701.2-201ENST00000416920 238 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC114482.1-201ENST00000418010 247 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.29□□□□□ -1.72
VAMP4O75379 AC096644.2-201ENST00000429278 159 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AL356867.1-201ENST00000429623 299 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 RPL23AP50-201ENST00000434149 455 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC108059.2-201ENST00000434626 151 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 NDUFB1P2-201ENST00000449477 176 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 FABP5P15-201ENST00000453566 214 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC034236.1-201ENST00000469891 373 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 RPL7P5-201ENST00000471472 736 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AL160314.1-201ENST00000490836 438 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC018437.1-201ENST00000492214 406 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.29□□□□□ -1.72
VAMP4O75379 RNU6-120P-201ENST00000516077 103 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VAMP4O75379 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.29□□□□□ -1.72
VAMP4O75379 AC109446.1-201ENST00000566172 220 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC113195.1-201ENST00000579952 141 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 MIR4425-201ENST00000580572 84 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.29□□□□□ -1.72
VAMP4O75379 AP000787.2-201ENST00000604432 568 ntBASIC4.29□□□□□ -1.72
VAMP4O75379 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VAMP4O75379 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VAMP4O75379 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VAMP4O75379 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.29□□□□□ -1.72
VAMP4O75379 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.28□□□□□ -1.72
VAMP4O75379 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.28□□□□□ -1.72
VAMP4O75379 MIR412-201ENST00000362142 91 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 MIR423-201ENST00000362201 94 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 MIR208A-201ENST00000362287 71 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 RNU6-1181P-201ENST00000384191 106 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 MT-TG-201ENST00000387429 68 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 RNU2-23P-201ENST00000410545 195 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 RNU2-71P-201ENST00000411395 189 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VAMP4O75379 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.28□□□□□ -1.72
VAMP4O75379 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
VAMP4O75379 AL731563.1-201ENST00000442202 214 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 Z75741.1-201ENST00000446793 314 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VAMP4O75379 RPL23AP31-201ENST00000456160 467 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.28□□□□□ -1.72
VAMP4O75379 NDUFB9P3-201ENST00000521269 501 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.28□□□□□ -1.72
VAMP4O75379 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.28□□□□□ -1.72
VAMP4O75379 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.28□□□□□ -1.72
VAMP4O75379 CPDP1-201ENST00000579660 283 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.28□□□□□ -1.72
VAMP4O75379 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.28□□□□□ -1.72
VAMP4O75379 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.28□□□□□ -1.72
VAMP4O75379 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.28□□□□□ -1.72
VAMP4O75379 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.28□□□□□ -1.72
VAMP4O75379 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.28□□□□□ -1.73
VAMP4O75379 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VAMP4O75379 AC093010.3-201ENST00000570269 15214 ntBASIC4.27□□□□□ -1.73
VAMP4O75379 Y_RNA.153-201ENST00000363615 91 ntBASIC4.27□□□□□ -1.73
VAMP4O75379 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VAMP4O75379 RNA5SP44-201ENST00000410446 133 ntBASIC4.27□□□□□ -1.73
VAMP4O75379 RPL21P66-201ENST00000426566 466 ntBASIC4.27□□□□□ -1.73
VAMP4O75379 RPL23AP82-202ENST00000427528 469 ntBASIC4.27□□□□□ -1.73
VAMP4O75379 AC005326.1-201ENST00000429197 123 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms