Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL590705.4-201ENST00000532209 134 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.9□□□□□ -1.79
TRIM13O60858 AC027288.2-201ENST00000553028 243 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM13O60858 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM13O60858 AC009318.2-201ENST00000610917 651 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 AC240442.1-201ENST00000616055 283 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM13O60858 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TRIM13O60858 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM13O60858 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM13O60858 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TRIM13O60858 MFSD8-216ENST00000641147 4009 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TRIM13O60858 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM13O60858 RNU1-18P-201ENST00000363062 164 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM13O60858 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM13O60858 RNU6-76P-201ENST00000384060 104 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 RNU6-1035P-201ENST00000384477 107 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM13O60858 HLFP1-201ENST00000402375 499 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 HSPE1P12-201ENST00000412576 301 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 AC244098.2-201ENST00000422068 99 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 AC083863.1-201ENST00000438811 231 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM13O60858 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM13O60858 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM13O60858 AC074133.1-201ENST00000515696 183 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.89□□□□□ -1.79
TRIM13O60858 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.89□□□□□ -1.79
TRIM13O60858 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM13O60858 MIR8076-201ENST00000611401 83 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 AC100827.5-201ENST00000615883 426 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 AC244205.2-202ENST00000635781 342 ntBASIC3.89□□□□□ -1.79
TRIM13O60858 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM13O60858 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM13O60858 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM13O60858 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
TRIM13O60858 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM13O60858 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM13O60858 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
TRIM13O60858 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM13O60858 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM13O60858 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM13O60858 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM13O60858 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM13O60858 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRIM13O60858 Y_RNA.418-201ENST00000384029 102 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 Y_RNA.534-201ENST00000384599 112 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 PRDX3P3-201ENST00000447765 522 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.88□□□□□ -1.79
TRIM13O60858 AC079354.2-201ENST00000453523 154 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 SNRPGP5-201ENST00000456003 220 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 RN7SKP210-201ENST00000459176 261 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 RN7SL303P-201ENST00000469773 251 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM13O60858 RPS27AP13-201ENST00000498403 237 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 HMGN1P11-201ENST00000508668 303 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 RNU6-1012P-201ENST00000516606 109 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 MIR2355-201ENST00000517199 87 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 AP004371.1-201ENST00000525240 214 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRIM13O60858 AC023824.2-201ENST00000566185 400 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 MIR4282-201ENST00000583613 67 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 AC009314.1-201ENST00000603871 304 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 AL365222.1-201ENST00000614661 98 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 RMST_4.1-201ENST00000616886 107 ntBASIC3.88□□□□□ -1.79
TRIM13O60858 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM13O60858 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
TRIM13O60858 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM13O60858 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
TRIM13O60858 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM13O60858 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM13O60858 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
TRIM13O60858 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM13O60858 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM13O60858 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM13O60858 SDAD1P2-201ENST00000441308 2028 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 RNA5SP399-201ENST00000364003 117 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 U3.15-201ENST00000365398 212 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 RNU6-326P-201ENST00000365480 107 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 Y_RNA.435-201ENST00000384095 112 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 Y_RNA.441-201ENST00000384123 112 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 SNORD63-201ENST00000384262 68 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 SNORD20-201ENST00000384550 80 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 SNORA12.2-201ENST00000391040 156 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 RNU6-651P-201ENST00000411040 105 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM13O60858 RPL23AP36-201ENST00000413895 458 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM13O60858 AC063979.1-201ENST00000415539 377 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM13O60858 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM13O60858 AL359073.1-201ENST00000448036 403 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM13O60858 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM13O60858 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM13O60858 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM13O60858 U8.21-201ENST00000459536 136 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms