Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNU6-727P-201ENST00000363592 107 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 Y_RNA.243-201ENST00000364481 109 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA3O60609 Y_RNA.432-201ENST00000384087 111 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 SNORA9-201ENST00000384215 133 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 MIR92A2-201ENST00000385299 75 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.84□□□□□ -1.63
GFRA3O60609 PPIAP31-201ENST00000405422 495 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 AC114755.2-201ENST00000413520 361 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 YME1L1P1-201ENST00000429435 297 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 BX323845.1-201ENST00000432417 179 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 AP000936.3-201ENST00000438127 255 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA3O60609 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA3O60609 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA3O60609 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.84□□□□□ -1.63
GFRA3O60609 AL355812.1-201ENST00000603215 216 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 FAM27B-201ENST00000610601 213 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.84□□□□□ -1.63
GFRA3O60609 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
GFRA3O60609 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA3O60609 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA3O60609 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.84□□□□□ -1.63
GFRA3O60609 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
GFRA3O60609 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
GFRA3O60609 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
GFRA3O60609 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.84□□□□□ -1.64
GFRA3O60609 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA3O60609 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA3O60609 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
GFRA3O60609 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GFRA3O60609 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
GFRA3O60609 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.83□□□□□ -1.64
GFRA3O60609 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.83□□□□□ -1.64
GFRA3O60609 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA3O60609 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA3O60609 SNORA63D-201ENST00000364359 132 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 RNU6-1264P-201ENST00000383891 107 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 MIR549A-201ENST00000385268 96 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 AL451046.2-201ENST00000403074 277 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 SNORA36B-201ENST00000410438 131 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 CYCSP19-201ENST00000411715 316 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA3O60609 AL691449.1-201ENST00000426570 421 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 MTATP6P21-201ENST00000440681 189 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA3O60609 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA3O60609 RPL23AP56-201ENST00000460778 453 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 RPL30P5-201ENST00000494923 336 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 SCARNA22-201ENST00000503991 125 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 SNORA70.12-201ENST00000516084 153 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 SNORA43.2-201ENST00000516652 128 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 AC084364.2-201ENST00000546924 395 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.83□□□□□ -1.64
GFRA3O60609 AL023881.1-201ENST00000621088 301 ntBASIC4.83□□□□□ -1.64
GFRA3O60609 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA3O60609 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA3O60609 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA3O60609 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
GFRA3O60609 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA3O60609 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA3O60609 AC106871.1-201ENST00000568324 3102 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA3O60609 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA3O60609 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
GFRA3O60609 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA3O60609 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
GFRA3O60609 RNU6-590P-201ENST00000365039 107 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 RNU6-1080P-201ENST00000383982 107 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 RNU6-402P-201ENST00000410678 103 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 NDUFB4P8-201ENST00000435351 367 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 GPM6BP3-201ENST00000442797 145 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 RPL23AP67-201ENST00000465341 474 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 SNRPGP3-201ENST00000469405 227 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 AC105137.1-201ENST00000484355 562 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.82□□□□□ -1.64
GFRA3O60609 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.82□□□□□ -1.64
GFRA3O60609 SNORA74D-201ENST00000516404 141 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 RNU6-267P-201ENST00000516714 103 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 IGLVIV-65-201ENST00000517313 360 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 AC136777.2-201ENST00000522979 358 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 AL356157.2-201ENST00000605122 111 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 AP005019.3-201ENST00000620418 560 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 SCARNA4-202ENST00000625402 129 ntBASIC4.82□□□□□ -1.64
GFRA3O60609 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA3O60609 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA3O60609 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
GFRA3O60609 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.82□□□□□ -1.64
GFRA3O60609 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA3O60609 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA3O60609 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA3O60609 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA3O60609 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA3O60609 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA3O60609 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
GFRA3O60609 BCORP1-203ENST00000513194 5093 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.81□□□□□ -1.64
GFRA3O60609 OR51H2P-202ENST00000641424 3046 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms